Query= MSMg01no476_c05.b1 MSMg01no476_c05.b1 CHROMAT_FILE:
MSMg01no476_c05.b1 PHD_FILE: MSMg01no476_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:09 2005
(296 letters)
>mm_chr4_140938644_140939339
Length = 696
Score = 536 bits (277), Expect = e-157
Identities = 291/301 (96%), Gaps = 10/301 (3%)
Strand = Plus / Minus
Query: 1 tacctcccagggtgcgggagaccaggccagggtgaggaggcctgcaatgtcactgttaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tacctcccagggtgcgggagaccaggccagggtgaggaggcctgcaatgtcactgttaag 546
Query: 61 ctatgcgacctcaggtgggtctccaagtctctctgagctcagttttctccctatgacgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ctatgcgacctcaggtgggtctccaagtctctctgagctcagttttctccctatgacgga 486
Query: 121 cggagcagagatgataagagcaggaagtgagtattgggacaagaggttctctttctggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cggagcagagatgataagagcaggaagtgagtattgggacaagaggttctctttctggtc 426
Query: 181 ctctgtcccctacactcccagtcatagggagaatcatgtgagaagagctaagggacgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctctgtcccctacactcccagtcatagggagaatcatgtgagaagagctaagggacgctt 366
Query: 241 cattgggacccaggtttg-----tttttgcagcacccaaaatccacctagtgcctgctca 295
|||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 365 cattgggacccaggtttgggaaa-----gcagcacccaaaatccacctagtgcctgctca 311
Query: 296 a 296
|
Sbjct: 310 a 310
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no476_c05.g1 MSMg01no476_c05.g1 CHROMAT_FILE:
MSMg01no476_c05.g1 PHD_FILE: MSMg01no476_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:09 2005
(124 letters)
>mm_chr4_140773949_140774472
Length = 524
Score = 240 bits (124), Expect = 2e-68
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 1 gctgggcaagtgggcctcggtgggtctctgggtggaggtggttgttagagacccaccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gctgggcaagtgggcctcggtgggtctctgggtggaggtggttgttagagacccaccctg 260
Query: 61 tctgcaggagcctgacttgaacattagtgagctgagaactgtgtgctgggctggctgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgcaggagcctgacttgaacattagtgagctgagaactgtgtgctgggctggctgcag 320
Query: 121 ggct 124
||||
Sbjct: 321 ggct 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 524
Length adjustment: 8
Effective length of query: 116
Effective length of database: 516
Effective search space: 59856
Effective search space used: 59856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
