Query= MSMg01no476_g04.b1 MSMg01no476_g04.b1 CHROMAT_FILE:
MSMg01no476_g04.b1 PHD_FILE: MSMg01no476_g04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:29 2005
(451 letters)
>mm_chr4_49299645_49300495
Length = 851
Score = 820 bits (424), Expect = 0.0
Identities = 442/448 (98%), Gaps = 2/448 (0%)
Strand = Plus / Minus
Query: 5 gaattccatagtcttccg-cattcaaatttttgtagattttaaaagtgactgaggaaatg 63
||||||||||||| | | ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 651 gaattccatagtcat-agacattcaaatttttgtagattttaaaagtgaccgaggaaatg 593
Query: 64 aggaaaacaatatagagaagttgccagcattgtgagagtaccctttattctggactttca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aggaaaacaatatagagaagttgccagcattgtgagagtaccctttattctggactttca 533
Query: 124 gctttcacaatgagtgccatgtcctctagatctgcagggaggctctgcttcctttacttc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gctttcacaatgagtgccatgtcctctagatctgcagggaggctctgcttcctttacttc 473
Query: 184 caaaactttgattagctcaagaattaccgacttttgctttatcatacatagatagaaaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 caaaactttgattagctcaagaattaccgacttttgctttatcatacatagatagaaaca 413
Query: 244 aataataggcactatcactagacacttcccgtgccttttaacagctcaagtaggcaatgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aataataggcactatcactagacacttcccgtgccttttaacagctcaagtaggcaatgc 353
Query: 304 tgttggtatgatagtgtttcgaaaaccattcagtgcctctgataaaatactagcaattga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tgttggtatgatagtgtttcgaaaaccattcagtgcctctgataaaatactagcaattga 293
Query: 364 cttctgacctggtccaagagctacgtctacctgctcagagagctgttgagactctgcatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cttctgacctggtccaagagctacgtctacctgctcagagagctgttgagactctgcatg 233
Query: 424 gcgttgtagaaaagccaaaccatatatt 451
| ||||||||||||||||||||||||||
Sbjct: 232 gtgttgtagaaaagccaaaccatatatt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_g04.g1 MSMg01no476_g04.g1 CHROMAT_FILE:
MSMg01no476_g04.g1 PHD_FILE: MSMg01no476_g04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:29 2005
(245 letters)
>mm_chr4_49119050_49119694
Length = 645
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Plus
Query: 1 tctgtggctgagtctcctatgtgttttctttcattactagcaatgtcatctccccaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtggctgagtctcctatgtgttttctttcattactagcaatgtcatctccccaccct 260
Query: 61 cttgtctgactcaagcattggcttccctttgaagttttgcatcacttgttttcccacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgtctgactcaagcattggcttccctttgaagttttgcatcacttgttttcccacatc 320
Query: 121 taagtccaatgcacacatttctaaaggtatactttccatcctagacataacgacactaag 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taagtcccatgcacacatttctaaaggtatactttccatcctagacataacgacactaag 380
Query: 181 tcaccataggcctggtttggggccatttctctgaggtaggggtttgaggatgcgaagttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaccataggcctggtttggggccatttctctgaggtaggggtttgaggatgcgaagttt 440
Query: 241 attg 244
||||
Sbjct: 441 attg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
