Query= MSMg01no476_j09.b1 MSMg01no476_j09.b1 CHROMAT_FILE:
MSMg01no476_j09.b1 PHD_FILE: MSMg01no476_j09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:44 2005
(353 letters)
>mm_chr4_76523375_76524128
Length = 754
Score = 617 bits (319), Expect = 0.0
Identities = 346/357 (96%), Gaps = 7/357 (1%)
Strand = Plus / Minus
Query: 1 gagtggcagaatgtcttcttattgttcttaaatagcctctcttgtattagaatacatcaa 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 554 gagtggcagaatgtcttcttattgttcttaaatatcctctcttgtattagaatacatcaa 495
Query: 61 gaatactctcaacaaatagatactagtgctaaccaaacacttgaacacctaacctacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gaatactctcaacaaatagatactagtgctaaccaaacacttgaacacctaacctacaaa 435
Query: 121 acaataatccttacaaacattttaaaaatatattatgtgatatcaca-tttttgggtaag 179
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 434 acaataatccaaacaaacattttaaaaatatattatgtgatatcacattttttgggtaag 375
Query: 180 caatagataatagattacata---cctcataatgatttctgtgtgttgagcttactatac 236
||||||||||||||||| || | |||||||||||||||||||||||||||||||||
Sbjct: 374 caatagataatagatta-ttaagtc--cataatgatttctgtgtgttgagcttactatac 318
Query: 237 atgaccatcattatgctttgattcagggattttcaagtgtaatcattaactgactttaca 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atgaccatcattatgctttgattcagggattttcaagtgtaatcattaactgactttaca 258
Query: 297 atcttaacatgaaatacaatacttacacattgttgaacatgatggtaaaacaaaaat 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atcttaacatgaaatacaatacttacacattgttgaacatgatggtaaaacaaaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 754
Length adjustment: 9
Effective length of query: 344
Effective length of database: 745
Effective search space: 256280
Effective search space used: 256280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_j09.g1 MSMg01no476_j09.g1 CHROMAT_FILE:
MSMg01no476_j09.g1 PHD_FILE: MSMg01no476_j09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:44 2005
(246 letters)
>mm_chr4_76348615_76349260
Length = 646
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%)
Strand = Plus / Plus
Query: 1 tcattggaaaaacgattttcccatgtgagaatcactcatctgatgaggcagtcgtttact 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcattggaaaaacgactttcccatgtgagaatcactcatctgatgaggcagtcgtttact 260
Query: 61 gagcaagcatgccattccaggttaggggagaaaccctgagttaaatgttgccttgctgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagcaagcatgccattccaggttaggggagaaaccctgagttaaatgttgccttgctgac 320
Query: 121 tgagttcagactatgttctaagccttaggtttaatgacatatgtcataaaaagaattatt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tgagttcagactatgttctaagccttaggtttaatgacatatgtcataaaaagaattaat 380
Query: 181 cccttcatttaactagacttcaggatgtaaaatatgtaacaaaaacctaacaaatattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccttcatttaactagacttcaggatgtaaaatatgtaacaaaaacctaacaaatattta 440
Query: 241 aagg 244
||||
Sbjct: 441 aagg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
