Query= MSMg01no476_p15.b1 MSMg01no476_p15.b1 CHROMAT_FILE:
MSMg01no476_p15.b1 PHD_FILE: MSMg01no476_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:16 2005
(183 letters)
>mm_chr4_108945769_108946351
Length = 583
Score = 346 bits (179), Expect = e-100
Identities = 182/183 (99%)
Strand = Plus / Plus
Query: 1 ctgagaaggatactcttatttgtgatttaattatagatttacagtaagggactgagctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgagaaggatactcttatttgtgatttaattatagatttacagtaagggactgagctga 260
Query: 61 ctgaatcagaatgcttcaaactctcaaacctttattttccttccttccttccttcctccc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 ctgaatcagaatgcttcaaactctcaaacctttattttccttccttccttccttccaccc 320
Query: 121 tctcttctcttctattcttctctcctctctcttcccctcccctccttccccctcccctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctcttctcttctattcttctctcctctctcttcccctcccctccttccccctcccctcc 380
Query: 181 ctc 183
|||
Sbjct: 381 ctc 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 583
Length adjustment: 8
Effective length of query: 175
Effective length of database: 575
Effective search space: 100625
Effective search space used: 100625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no476_p15.g1 MSMg01no476_p15.g1 CHROMAT_FILE:
MSMg01no476_p15.g1 PHD_FILE: MSMg01no476_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:16 2005
(172 letters)
>mm_chr4_109152723_109153295
Length = 573
Score = 294 bits (152), Expect = 2e-84
Identities = 167/172 (97%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 1 tatgaccttacaatggatgtgacatcatggaggtgataggaattttcaacccattgtgtt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 372 tatgaccttacaatggatgtgacatcatggagctgataggaattttcaacccattgtgtt 313
Query: 61 cttatgggatcatggtggatcaccaagatcaataaccacttaccttttttaaaaaaaggg 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 312 cttatgggatcatggtggatcaccaagatcaataaccacttacctttttttaaaaaaggg 253
Query: 121 ttgtttttt-aattgtgtttgggtatgtacatgtgtgcgagcgcccacagag 171
||||||||| ||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 252 ttgtttttttaattgtgtttgggtatgtacatgtgtgtgagtgcccacagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 573
Length adjustment: 8
Effective length of query: 164
Effective length of database: 565
Effective search space: 92660
Effective search space used: 92660
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
