GGAAGGGGAGCGTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCATCAATTTCGTTTTTATGGATATAAGTCAAAACCAAG
ACAAACCAAATGTTCTGCACTCTGGCAAATATGGGAACAGTGGAGCCGAG
AAACTTAACTGTGCCTCATTTCTCTAGGGATTCTCTGTAGAGGANACTGA
TGTAAATACTTGACTGTCCAACAGAATAAGGATCTAAACATTGCCTAAAT
GAAACACCAATTAGCTGGCAAGATGAGTGTTCTGCATCACACTGTTTTAA
TAGTTATTATTATTCTATATGTTAGAATATCTTTCATTTTTATGTAGTAA
AATGATTATAGGTAAATGAAATTTTCATCAAAATCCATTGATTCTTGAAA
ATAAGGTACACTCTTTGTGAAAAAGGCCTCATTTTGATTGACTTTATATT
CTTCTTTTATCTTTTTCAAATACTGCACATTATTTTTTCTGATTTTTGCA
TTGATTTCTGTCTGATTTTCCAAAAGACTATATTACCAACCTCTGTATAA
AAAAACCATATTTGTAGTGTTGTTTCTGCTTGGCTATTAAATATTGGTCA
TCCTGAAGAACTTGGGCTCCCTGATTACAATCATCCAGGAGACAAGAACT
TCACCTACCACAGTTAATAAATCCAGAGAATAGATTTGGAGTCTGGTTAT
AAGAA

CCAAAANCCCCAATGATAGTGNGTAGGCCTGGNGGCCGCCATTCAGACGA
GGGTTAGGNGACACTATATTTCCAAAAACGGAATTCATTGTGTGCTTTCC
CCTGTGAACTCGCAGGGGGAAAAGCCAGCCTCACTTACAAATGCCCTTAG
TAAGAAATAAAAATAATGCTTTTTATTGAATCTCTGTGAATCTTTTGCAT
GATAAAATGTGTGGATACCCAGTGCTCTCTGCCAGATGCAGCTGACTCCT
GTGAGACTTACAGGTCCTTTCAGGTGATGCTGGAGTTCAGCAGCTTTCTA
CACAACCCCAGTTTCCTTGATCAATTTTCTTGGAAACCATTTTTTCCCCA
AATTTTGGTATTTGGTAGAGATTTTCTCCAGAAACAACCAGAGTTGAACT
ACATATAGTGTGGAGAGCCGCGAGCAATCACCATTACAAGCCTCTGCTGT
GCCTAACTGGTAAACAAGTAATGTGCGCAGGTGCAAGAGTAAATTCGTGC
CAAGTCACTGCCCATCCTGGGGCGTAGTAGTGGGATGATGAGTGAGCAGC
TAATCAGGAGCTGACACGTCACATGGAGGGGTATATAAGCAGCACCATTT
TCCTTGTTCGGGGTCTTCCTTCAGATGAAGCAATAAAGCTTTGCAGTATA
ATAATCCGGTTGTCCGAGTGAATTCTTGCTGACGAGATACTAGCTCGGGA
TAAGTGGCGCTGAAAACCCG

Query= MSMg01no477_g12.b1 MSMg01no477_g12.b1 CHROMAT_FILE:
MSMg01no477_g12.b1 PHD_FILE: MSMg01no477_g12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:50 2005
         (631 letters)



>mm_chr4_7175118_7176145
          Length = 1028

 Score = 1199 bits (620), Expect = 0.0
 Identities = 627/631 (99%), Gaps = 3/631 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttttatggatataagtcaaaaccaagacaaaccaaatgttctgcactctggcaaatatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 ttttatggatataagtcaaaaccaagacaaaccaaatgttctgcactctggcaaatatgg 769

                                                                       
Query: 61  gaacagtggagccgagaaacttaactgtgcctcatttctctagggattctctgtagagga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gaacagtggagccgagaaacttaactgtgcctcatttctctagggattctctgtagagga 709

                                                                       
Query: 121 nactgatgtaaatacttgactgtccaacagaataaggatctaaacattgcctaaatgaaa 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 aactgatgtaaatacttgactgtccaacagaataaggatctaaacattgcctaaatgaaa 649

                                                                       
Query: 181 caccaattagctggcaagatgagtgttctgcatcacactgttttaatagttattattatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 caccaattagctggcaagatgagtgttctgcatcacactgttttaatagttattattatt 589

                                                                       
Query: 241 ctatatgttagaatatctttcatttttatgtagtaaaatgattataggtaaatgaaattt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ctatatgttagaatatctttcatttttatgtagtaaaatgattataggtaaatgaaattt 529

                                                                       
Query: 301 tcatcaaaatccattgattcttgaaaataaggtacactctttgtgaaaaaggcctcattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tcatcaaaatccattgattcttgaaaataaggtacactctttgtgaaaaaggcctcattt 469

                                                                       
Query: 361 tgattgactttatattcttcttttatctttttcaaatactgcacattattttttctgatt 420
           ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tgattgactttata---ttcttttatctttttcaaatactgcacattattttttctgatt 412

                                                                       
Query: 421 tttgcattgatttctgtctgattttccaaaagactatattaccaacctctgtataaaaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tttgcattgatttctgtctgattttccaaaagactatattaccaacctctgtataaaaaa 352

                                                                       
Query: 481 accatatttgtagtgttgtttctgcttggctattaaatattggtcatcctgaagaacttg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 accatatttgtagtgttgtttctgcttggctattaaatattggtcatcctgaagaacttg 292

                                                                       
Query: 541 ggctccctgattacaatcatccaggagacaagaacttcacctaccacagttaataaatcc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggctccctgattacaatcatccaggagacaagaacttcacctaccacagttaataaatcc 232

                                          
Query: 601 agagaatagatttggagtctggttataagaa 631
           |||||||||||||||||||||||||||||||
Sbjct: 231 agagaatagatttggagtctggttataagaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1028
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1018
Effective search space:   632178
Effective search space used:   632178
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)