NNAAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTCAGAGAGAT
GGCGGAATTCACAATGTATTCCAGAGCCACGAAGTTCTGCTGCTCCTGCC
TTTATCCCTCAAGTGCTGGATAGGTCTGACCCACCATGCTCAGATTCTAA
TTACATATTTAAAAAGAAACAGAAGTCTTTTCTAAAAAAATCAAAGCCCT
AATCAAAACTATCGTGTTTAGTTTTGCTTTTTCTCTTATAATACAAAACC
AATGTAAGTAAAACAATTCTCTATAATCGAAGCAGAGAAATGAGGAAAGG
GTAGCTATAAACTGAAATGGCTAATTATGTTCAAAAACCAGTATACCAGC
TGCCCTCATTCTGGCCCCAGCCTTATATAACAACTCTCCTGAAACTTGAA
GCTGAAGGGCCTCCAAGGTGTGAGGAAGGACACTGGTATGAAGTTCATTC
ACTTCCTCACTACTGTATGGATAGGAGATTGGTGGTAGAAGCCAAGATGG
GAAGATGAAAGGGTTTTCAACAGTTTTCCTTATTTAAATGAAATAAAATA
TTCTAGGTATTGATGGCAGAAAGGAGCAGAATCCTGAGAGAAGGAAAGGG
CCAAAGAGGCCTTTGTCTGACATCAAAGCACACTGCTATTAGCCTGCTCC
ATGGAGCTTTAAATCCAAGTCTACATAGCACTCTGCAAACCCCGCCTGTC
AGCTGCCCTTGAGCATCCTGCTTN

TTTCCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXACTCTGTAGACCAAACTGGCCTT
GAACTCACAGAGAAGCATCTGCCTCTGTCTTCCAAGTGTTGAGATTAAAG
GCGTGCGCCACATCCTGATTTTGGTCCCCATTCTCCAGAGCCCTCTACTT
TCTTCCTGTTGTGCACTTGGCTCAGCAGCCGCTCCAGAGCCTCTGTCCGT
CCTCATTGTCATAACTTCTGTTGTCTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTTNGTTTTTTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTTTTTTTTTTCTNNNNNNTTTTNNTNTTNTTTTTTTTNN
NTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNN
TTNTTTTTTTTNTTTTTTTTTNNTTTTTTTTTTTTTTTTTTTTNTTTTTT
TNTTNTTTNNTTTTTTNTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTNNTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTT
NTTTTTTTTTTTTTTTTTTTTNTTTNNTTTTTTTTTTTTNNTTTTTTTTT
TTTTTTTTTTTTTTTTTTTNTNNNNTNTTTTTTTTTTTTTTTTTTTTTTT
NTTTTTTTTTTNNTTTTTTTTTTTNTTTTT

Query= MSMg01no480_e24.b1 MSMg01no480_e24.b1 CHROMAT_FILE:
MSMg01no480_e24.b1 PHD_FILE: MSMg01no480_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:34 2005
         (646 letters)



>mm_chr4_123199777_123200821
          Length = 1045

 Score = 1216 bits (629), Expect = 0.0
 Identities = 641/645 (99%), Gaps = 1/645 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acgaagttctgctgctcctgcctttatccctcaagtgctggataggtctgacccaccatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acgaagttctgctgctcctgcctttatccctcaagtgctggataggtctgacccaccatg 260

                                                                       
Query: 61  ctcagattctaattacatatttaaaaagaaacagaagtcttttctaaaaaaatcaaagcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 ctcagattctaattacatatttaaaaagaaacagaagtcttttctaaaaaa-tcaaagcc 319

                                                                       
Query: 121 ctaatcaaaactatcgtgtttagttttgctttttctcttataatacaaaaccaatgtaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctaatcaaaactatcgtgtttagttttgctttttctcttataatacaaaaccaatgtaag 379

                                                                       
Query: 181 taaaacaattctctataatcgaagcagagaaatgaggaaagggtagctataaactgaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taaaacaattctctataatcgaagcagagaaatgaggaaagggtagctataaactgaaat 439

                                                                       
Query: 241 ggctaattatgttcaaaaaccagtataccagctgccctcattctggccccagccttatat 300
           ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggctaattaggctcaaaaaccagtataccagctgccctcattctggccccagccttatat 499

                                                                       
Query: 301 aacaactctcctgaaacttgaagctgaagggcctccaaggtgtgaggaaggacactggta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aacaactctcctgaaacttgaagctgaagggcctccaaggtgtgaggaaggacactggta 559

                                                                       
Query: 361 tgaagttcattcacttcctcactactgtatggataggagattggtggtagaagccaagat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgaagttcattcacttcctcactactgtatggataggagattggtggtagaagccaagat 619

                                                                       
Query: 421 gggaagatgaaagggttttcaacagttttccttatttaaatgaaataaaatattctaggt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gggaagatgaaagggttttcaacagttttccttatttaaatgaaataaaatattctaggt 679

                                                                       
Query: 481 attgatggcagaaaggagcagaatcctgagagaaggaaagggccaaagaggcctttgtct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 attgatggcagaaaggagcagaatcctgagagaaggaaagggccaaagaggcctttgtct 739

                                                                       
Query: 541 gacatcaaagcacactgctattagcctgctccatggagctttaaatccaagtctacatag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gacatcaaagcacactgctattagcctgctccatggagctttaaatccaagtctacatag 799

                                                        
Query: 601 cactctgcaaaccccgcctgtcagctgcccttgagcatcctgctt 645
           ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 800 cactctgcaaaccccgcctgttagctgcccttgagcatcctgctt 844


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1045
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1035
Effective search space:   658260
Effective search space used:   658260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)