Query= MSMg01no480_m09.b1 MSMg01no480_m09.b1 CHROMAT_FILE:
MSMg01no480_m09.b1 PHD_FILE: MSMg01no480_m09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:11 2005
(189 letters)
>mm_chr4_152660012_152660601
Length = 590
Score = 360 bits (186), Expect = e-104
Identities = 189/190 (99%), Gaps = 1/190 (0%)
Strand = Plus / Minus
Query: 1 cacttactaacacatctgtgtatctagctgtagatccctgacacctccatggctgccgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cacttactaacacatctgtgtatctagctgtagatccctgacacctccatggctgccgtg 331
Query: 61 accactgtgtaagatgacatggcatgccacatttccacagactcctctcaccttccattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 accactgtgtaagatgacatggcatgccacatttccacagactcctctcaccttccattg 271
Query: 121 tcccact-caacgtgtcagcctggtggcattcctgcatgtcagcgccatcttgactcagt 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tcccactgcaacgtgtcagcctggtggcattcctgcatgtcagcgccatcttgactcagt 211
Query: 180 tggctttgaa 189
||||||||||
Sbjct: 210 tggctttgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 590
Length adjustment: 8
Effective length of query: 181
Effective length of database: 582
Effective search space: 105342
Effective search space used: 105342
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no480_m09.g1 MSMg01no480_m09.g1 CHROMAT_FILE:
MSMg01no480_m09.g1 PHD_FILE: MSMg01no480_m09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:11 2005
(126 letters)
>mm_chr4_152490931_152491456
Length = 526
Score = 236 bits (122), Expect = 4e-67
Identities = 125/126 (99%)
Strand = Plus / Plus
Query: 1 cgatggaggcacttgggaagccattaccaggaggctctaagagcccagagtcccatttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgatggaggcacttgggaagccattaccaggaggctctaagagcccagagtcccatttag 260
Query: 61 ggccccccacccagggcattcattccgaccccatcgtttctagatgctgtcatggtagtt 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggccccccacccagggcatccattccgaccccatcgtttctagatgctgtcatggtagtt 320
Query: 121 tatgaa 126
||||||
Sbjct: 321 tatgaa 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 526
Length adjustment: 8
Effective length of query: 118
Effective length of database: 518
Effective search space: 61124
Effective search space used: 61124
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
