TCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCTGATGCCTACCGAATGGCAGAGAAGCACCTGAAAAAATGTT
CAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTC
CACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAG
ATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGG
ATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGA
AAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCAT
ATATCCAGAAGATGCCCCAACTGGTAAGAAAGACACATGCTCCACTATGT
TCATAGCAGCCTTGTTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGC
CCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGA
GTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAAT
GGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGG
AACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCCAAACCTA
GGATACCCAAGATATAAGATACAATTTGCTAAACACATGANACTCAAGAA
GAATGAAGACTGAAGTGTGGACACTATGCCCCTCC

AATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATCTGGCAAACAGACAATCCAGAAGGC
TCTGTGACCATTTTGTGATGTGAATTCTCAAAACACAAAGGGGCTGATAA
ATATTTCACATTAACAAAGGCTTTGGGAAGCATTCGGATGTCAAAAATGT
AACAATTTTTTCACATTTCTAGTTGAAATTACAGGTAGCATTGCCCATCC
ACTCACTTACCCAGAATCCTCATCAATTACCCTTATCCTGTGTCCTTTAG
AAAATCAGGTCACATTTCAACGCCATAGAGGCTGCGCAGTCCCCTGGGGT
TCCCACAAGCATCCCTGTTCCAGCCTCTGTGGTCCCCCTGACAAGGGACC
CAGGCTACTGAGCCTGGGAACCCATCCCAAAAGCCCAGCCCTACGGAGAC
TTGGGAACCTCTTACTTCTCCTATTAGCTCAGGGTGTCACAGGTCTCTGG
CCTTAAGAATCAGTGCCCCCACAGATCCTTCTGATCAAGATCCTAACTTT
TTTCTTCTAGGAAGAAGCCTTAGAACTCCACATTTTGAGTGAGAGGCACG
CAATAGGAATGAAATACACAAGGAAGCCAGTGGGAAATGACTGCTGGCCA
TGGAGATCGGAATCGCAATCCAAGGCTGGGCTGGGGATGTTGCAGGTGTA
CAGCATCTTTTCAGTTAGGGACTGTTGCCTCCGT

Query= MSMg01no481_m01.g1 MSMg01no481_m01.g1 CHROMAT_FILE:
MSMg01no481_m01.g1 PHD_FILE: MSMg01no481_m01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:30 2005
         (600 letters)



>mm_chr4_4059426_4060421
          Length = 996

 Score = 1102 bits (570), Expect = 0.0
 Identities = 591/600 (98%), Gaps = 4/600 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atctggcaaacagacaatccagaaggctctgtgaccattttgtgatgtgaattctcaaaa 60
           ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 796 atctggcaaacagacaatccagaaggctctgtggccattttgttatgtgaattctcaaaa 737

                                                                       
Query: 61  cacaaaggggctgataaatatttcacattaacaaaggctttgggaagcattcggatgtca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 cacaaaggggctgataaatatttcacattaacaaaggctttgggaagcattcggatgtca 677

                                                                       
Query: 121 aaaatgtaacaattttttcacatttctagttgaaattacaggtagcattgcccatccact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aaaatgtaacaattttttcacatttctagttgaaattacaggtagcattgcccatccact 617

                                                                       
Query: 181 cacttacccagaatcctcatcaattacccttatcctgtgtcctttagaaaatcaggtcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cacttacccagaatcctcatcaattacccttatcctgtgtcctttagaaaatcaggtcac 557

                                                                       
Query: 241 atttcaacgccatagaggctgcgcagtcccctggggttcccacaagcatccctgttccag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atttcaacgccatagaggctgcgcagtcccctggggttcccacaagcatccctgttccag 497

                                                                       
Query: 301 cctctgtggtccccctgacaagggacccaggctactgagcctgggaacccatcccaaaag 360
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cctatgtggtccccctgacaagggacccaggctactgagcctgggaacccatcccaaaag 437

                                                                       
Query: 361 cccagccctacggagacttgggaacctcttacttctcctattagctcagggtgtcacagg 420
           |||||||||||||||||||||||||||    |||||||||||||||||||||||||||||
Sbjct: 436 cccagccctacggagacttgggaacct----cttctcctattagctcagggtgtcacagg 381

                                                                       
Query: 421 tctctggccttaagaatcagtgcccccacagatccttctgatcaagatcctaactttttt 480
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctctggccttaagaatcattgcccccacagatccttctgatcaagatcctaactttttt 321

                                                                       
Query: 481 cttctaggaagaagccttagaactccacattttgagtgagaggcacgcaataggaatgaa 540
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 320 cttctaggaagaagccttagaactccacattttgagtgagaggcaagcaataggaatgaa 261

                                                                       
Query: 541 atacacaaggaagccagtgggaaatgactgctggccatggagatcggaatcgcaatccaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atacacaaggaagccagtgggaaatgactgctggccatggagatcggaatcgcaatccaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 996
Length adjustment: 10
Effective length of query: 590
Effective length of database: 986
Effective search space:   581740
Effective search space used:   581740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)