GCTXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCATATTTAGA
GATTTTTTTTTGTTTGCATAACTTATTTTTAAATATTCTAGCTTTTGTTT
TATTTTGAATATTTTTTATTCTCTCCTCCTTTCTGTTATCCCACTGGTCA
ACTCTCTGCAACAAGAGGCAAGCAGGGAAGCTTGGATTCTAAGCTTAGGT
GTAGAGAGAGAAAGCTCCTGACCTTTATCATACCTTATGTGTTTTCTCTG
TTGACATATTCACAGACATAGGCACTCACTGATATATATGCAACAAGAGC
TGAAATTGTTCAGAGAAGTCCCTGAAGGAAGCACATTTACCCTCAAAGTT
GGTTTTCTTGCATTTGGGTCAACTAACACTCTCTCAATAGGTGTGTGATG
CACTCTTTATTAATGCAGAAGGATGTTATTTCTAAATCACATTTTTGCTC
TGGCAATATAATAATGATTAAGTCCTAACTGAGCTCCCTATATAAACAGT
AGGAATTCTGTAGCAGATGCAAAGTCTTTCATAGCAGTCTTTGCCTTTCA
AGAGCATCTTCTCCTAGAGCCACTTATTGCACAGATCCCACACTAGGAAG
TTAGCAGTGTCGTAGAACATATTATGCTCTTTCACATGCTATTTGCTCCA
GCATAATTTCCTTCCATCATGCCAGAACTTTCCATTGTTTTTGTA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCCGAGGAATACCGAAAGGCTGAG
AAACACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTGAGATTCCATCTCACACCAGTCAGAATGGCTAAGATCA
AAAATTCAGGTGACAGCAGATGCTGGAGAGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATC
AGTCTGGTGGTTCCTCCGAATTTTGGACATAGTACTACCGGAGGATCCCA
CAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAG
GACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAG
CTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAAAAAATGT
GGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAACAATGAATTA
CGAAATTCCTAGGCAAATGGTTGGACCTGGAGGGCATCATCCTGAGTGAG
GTGACCCAATCACAAAAGAACTCAAATGAAATGTACTCATTGATAAGTGG
ATATTAACCCAGAAACTTAGTATAGCGAGATATAAGGTACAATATGTAAA
ACATATGAAACTGAAGAAGAACGAAGACCAAAGTGTGGAC

Query= MSMg01no482_d10.b1 MSMg01no482_d10.b1 CHROMAT_FILE:
MSMg01no482_d10.b1 PHD_FILE: MSMg01no482_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:04 2005
         (666 letters)



>mm_chr4_90553447_90554508
          Length = 1062

 Score = 1139 bits (589), Expect = 0.0
 Identities = 644/663 (97%), Gaps = 4/663 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctcatatttagagatttttttttgtttgcataacttatttttaaatattctagc 63
           |||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 204 ggaattctcatagttagagatttttttt-gtttgtataacttatttttaaatattctagc 262

                                                                       
Query: 64  ttttgttttattttgaatattttttattctctcctcctttctgttatcccactggtcaac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttttgttttattttgaatattttttattctctcctcctttctgttatcccactggtcaac 322

                                                                       
Query: 124 tctctgcaacaagaggcaagcagggaagcttggattctaagcttaggtgtagagagagaa 183
           ||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||
Sbjct: 323 tctctgcaacaagaggcaagcagggaagcttggattctaaggttaggtat-gagagagaa 381

                                                                       
Query: 184 agctcctgacctttatcataccttatgtgttttctctgttgacatattcacagacatagg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agctcctgacctttatcataccttatgtgttttctctgttgacatattcacagacatagg 441

                                                                       
Query: 244 cactcactgatatatatgcaacaagagctgaaattgttcagagaagtccctgaaggaagc 303
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cactcactgatatat--gcaacaagagctgaaattgttcagagaagtccctgaaggaagc 499

                                                                       
Query: 304 acatttaccctcaaagttggttttcttgcatttgggtcaactaacactctctcaataggt 363
           ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |
Sbjct: 500 acatttaccctcaaagttatttttcttgcatttgggtcaactaacactctctcaatagat 559

                                                                       
Query: 364 gtgtgatgcactctttattaatgcagaaggatgttatttctaaatcacatttttgctctg 423
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 560 gtgtgatgcactctttattaatgcagaaggatgttatttctaaatcacatttttgccctg 619

                                                                       
Query: 424 gcaatataataatgattaagtcctaactgagctccctatataaacagtaggaattctgta 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 620 gcaatataataatgattaagtcctaactgagctccctatataaacagtaggaattatgta 679

                                                                       
Query: 484 gcagatgcaaagtctttcatagcagtctttgcctttcaagagcatcttctcctagagcca 543
           |||||||||||| |||||||||||||||||||||||||||||  |||||| |||||||||
Sbjct: 680 gcagatgcaaagcctttcatagcagtctttgcctttcaagagtgtcttcttctagagcca 739

                                                                       
Query: 544 cttattgcacagatcccacactaggaagttagcagtgtcgtagaacatattatgctcttt 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cttattgcacagatcccacactaggaagttagcagtgtcgtagaacatattatgctcttt 799

                                                                       
Query: 604 cacatgctatttgctccagcataatttccttccatcatgccagaactttccattgttttt 663
           ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 800 cacatgctattcgctccagcataatttccttccatcatgccagaactttacattgttttt 859

              
Query: 664 gta 666
           |||
Sbjct: 860 gta 862


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1062
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1052
Effective search space:   690112
Effective search space used:   690112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)