NNNNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACATGTGCTTCTGTCCTATTATGTCTGGAAGATGGATA
CCTTGGAGTCATCCATACCTCTATCTGACAATGTTTCTGCCTCCTTTTCC
ACATAGGTTCCCGAGTCTTGAAATTAGATGTTTGATGTAAACACCCCTTT
TAGGACTAAATTCTCCAAATTCCTTTACTCTCCGCATATTGTCTGGAATA
AATGTGCCTTCAACAAGGATGAAACTAGTATCCGTTTGGATCCACATCAT
TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGA
GAGAGAGAGACAGACAGACAGACAGACAGACAGAGAGACAGAGAGAGAGA
CAGAGAGAGAAAGAAGTCCATACAGGTTAGTAATTAGCCTTGCAGTATAA
TTTTCTTTTATTACAAACAATGAAAACAAATTCTGAATTGAGAAGGTAGT
GCCTGCTGGGAGACTGTGATTGGAAGCCTAGAACACAGAGTTTGGGTGAG
CGAAATATGCTCATAAAATTGAGACAGGCAGTGCTGGCTGATTAATTAAC
CCAGTTTGCTTTACTCTCTTTCTTTTCACACAGCCTGTCTTTTAAGCTGT
TTTAAGGTTCACAGTCATTAAAAAGTATGCTTGTTTGTCCTANATTTGGG
TACCACTATTCTTGATTGGAGTGGGTCCTGAAAAGAAAGATGTCCCAAAA
TAATTACCAATACCCCCTTCCAAG

NNNNNACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTAGCC
CATTTTTTGTTAGGGTTCTTTGATTCTCTGGAGTCTACCTTCTTGAGTTC
TTTGTATATATTGAACATTATCTCTCTATCAGATATAAGATTGGTAAAGA
TCTTTTCCCAATCTGCTGGTTGCCACTTTGTCTTATTGACAGTGTCCTCT
GTCGAACAGAAACTTTGCAATTTTCTGAGGTTCCATTTGTCTATTTTTAA
TCTTAGAGCATAAAACATTGGTGTTGTGTTCAGGAAAATTTCCCGTGCCT
ATATGTTCAAGGATCTTCCCTACTTTCTCTTCTGTTAGTTACAGTGTAGG
TGGTTTTATGTGAAGGTCCTTGATCCTTTCTGCATGCATGATTTTTTGTA
TGGTTCCATATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTG
TGTGTGTCCNTGTTGTTTGTTCTGTNCTNNNTTATTTTTTAGGTGTTTCT
TTGGGTTCCNGGNNTTTTATTTTGACTTATCTGTTATTTGGATTATCTTT
ACTTAACCAATATGTTGCACTTTTCAGTTTGAAAAAAATTACTCAAGAAT
CTGTTGTATATTTACTGGCCTGTAAAATTAAAGTTACTCAATGTTGTAGC
GGCCTTTTATGCACGACTTTGTATGAAATGGACCATGGATTTATAAACCC
CTCCTGATTGATATCATA

Query= MSMg01no483_e22.b1 MSMg01no483_e22.b1 CHROMAT_FILE:
MSMg01no483_e22.b1 PHD_FILE: MSMg01no483_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:28 2005
         (576 letters)



>mm_chr4_7349414_7350389
          Length = 976

 Score =  905 bits (468), Expect = 0.0
 Identities = 562/632 (88%), Gaps = 62/632 (9%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacatgtgcttctgtcctattatgtctggaagatggataccttggagtcatccat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gaattcacatgtgcttctgtcctattatgtctggaagatggataccttggagtcatccat 206

                                                                       
Query: 65  acctctatctgacaatgtttctgcctccttttccacataggttcccgagtcttgaaatta 124
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 207 acctctatctgacaatgtttctgcctccttttccacataggttccttagtcttgaaatta 266

                                                                       
Query: 125 gatgtttgatgtaaacaccccttttaggactaaattctccaaattcctttactctccgca 184
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 267 gatgtttgatgtaaacaccccttttaggactaaattctccaaattcatttactctccgca 326

                                                                       
Query: 185 tattgtctggaataaatgtgccttcaacaaggatgaaactagtatccgtttggatccaca 244
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 327 tattgtctggaataaatgtgccttcaacaaggatgaaacgagtatccgtttggatccaca 386

                                                                       
Query: 245 tcatttgtgtgtgtgt----------------------------------gtgtgtgtgt 270
           ||||||||||||||||                                  ||||||||||
Sbjct: 387 tcatttgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 446

                                                                       
Query: 271 gtgtgtgtgtgtgtgtgagagagagagagagagagaga---------------------- 308
           ||||||||||||||||||||||||||||||||||||||                      
Sbjct: 447 gtgtgtgtgtgtgtgtgagagagagagagagagagagagagagagaaagagagagagaga 506

                                                                       
Query: 309 --cagacagacagacagacagacaga--gagacagagagagagacagagagagaaagaag 364
             ||||||||||||||||||||||||  ||||||||||||||  |||||||||| |||||
Sbjct: 507 gacagacagacagacagacagacagacagagacagagagaga--cagagagagagagaag 564

                                                                       
Query: 365 tccatacaggttagtaattagccttgcagtataattttcttttattacaaacaatgaaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tccatacaggttagtaattagccttgcagtataattttcttttattacaaacaatgaaaa 624

                                                                       
Query: 425 caaattctgaattgagaaggtagtgcctgctgggagactgtgattggaagcctagaacac 484
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 625 caaattctgaattgagaaggtagtgcctgctgggagactgtgattggaagcctagagcac 684

                                                                       
Query: 485 agagtttgggtgagcgaaatatgctcataaaattgagacaggcagtgctggctgattaat 544
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 685 agagtttgggtgagcgaaatatgctcataaaattgagacaggcggtgctggctgattaat 744

                                           
Query: 545 taacccagtttgctttactctctttcttttca 576
           ||||||| ||||||||||||||||||||||||
Sbjct: 745 taacccaatttgctttactctctttcttttca 776


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 87
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space:   546756
Effective search space used:   546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)