NNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCAGGGTACGTAAGCTCCCTCTTTTCAGAGGAAAAGGGGAGA
GGGAAGTGGGGAAGGAATTGTGTGAGACTTGGAGGGAAGGGAGCTGATAC
TGTGATGTAACATGAGTAATTAAATTAATGGGGGAAAAAAGAAAAAGAGG
CCACAAATTTGAAAGAGTAAGAAGGTCTCCTTGGAGATGTTGGAGGGGGA
AGAGAATGGGGAAATGATGTATTATAATTTTAAAAATTATTGTNAANAAA
TTTTTAAGGAAANNAATTTTTTTTTATTTTNGAAAGAAAANNAAAAATAA
AANAANAAAAATTTTTTTGGATACTTTCTNTTTTATTAATGGTATTTTTG
TCTTGTTTATTGTTGCCCCCCCCCGTGTGTTNANTATAAAAAACAGTAAA
ATTGANNTCATAATATNATTTCAGAATTTGACCTGTGAACACTGAATTCC
TCTTTTGGTCCACTTTTTCTACCAAACTCTCCCACATAATCTGGTTTCAG
ATTGTCTGTTAATTCTCCCCACAATTCTTGCCGCTCCTTGCTATGCACCA
CACCTCACTTGTTCCATACATTTTTTTTGTTTTTTGCCCAAGCCTCCCTT
TGGTTCCGCCTCCTAATTTTTTTTTCTCTAATCTTTTTACTTTCTTTGCC
CCACTTTTATTTTTGCTTCCTATTTCTTACGAGTCTCTCCTTTATTTCTT
TCCCCCCTCTGTTTCACACGTATTTCTTTG

NNNCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGCTGAAAAAGTCTGTCC
TTGTTTAACTATTGCTGGCCTGTGGTTTTGAATGTAATAGAAGCGTCAGC
TCAGCCTGCTATAGTCCTGAGCCCTTGAAGTAGACACAGTGATGTCACCC
TGTTCCATATGGCATGGAAAAATATTAGTGTCAGTCACACCTTGAGATCC
TTAAACTGCTGTTGCCCCACAGTCTGTCCAATGGCCTCTGGCTTACAGAA
ACCTCAGCCCAAGTATTTCATCTTCTCCTAGAAGGAATGGCCACAGATGG
GCTTCAGCCATATGGAGCAGGCTAGTCACAGGTCCTGTCTCCCAGACCCT
GGGCATGCTTTGGCGGAGGAACTGATACGGCTATCTCCCTTCTGGACATG
GTTGTTTGCTGTCAATCCTGGGGCGCCTGGCCTGGCCTGTAGCCTCTGGT
GAGCAGCCTTCTAGCCCTGGGATAGACACAAGTAACTTGAACCTCTCACC
TTCCATCTCCACTTACCTTTGCATATCCCAAGCGCCAGAGACCTGGCCCT
TTTGGTGGTTAATAACTTTTAATAAAGTGGGAAGAAGAAGAAGAAAAAAA
AGAATAAACCGACTTTAGCGAAAGCATACAGCAGTGTTTTCATTGCCATT
CCAGTCCCCTGAGGTTCCGATTGCATTGCTGGCCTGCAAAGCTGTTTTGG
AGAGATGTATCTTGTTTTAAN

Query= MSMg01no483_n10.g1 MSMg01no483_n10.g1 CHROMAT_FILE:
MSMg01no483_n10.g1 PHD_FILE: MSMg01no483_n10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:11 2005
         (585 letters)



>mm_chr4_94205365_94206349
          Length = 985

 Score = 1100 bits (569), Expect = 0.0
 Identities = 581/585 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgctgaaaaagtctgtccttgtttaactattgctggcctgtggttttgaatgtaataga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ttgctgaaaaagtctgtccttgtttaactattgctggcctgtggttttgaatgtaataga 726

                                                                       
Query: 61  agcgtcagctcagcctgctatagtcctgagcccttgaagtagacacagtgatgtcaccct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 agcgtcagctcagcctgctatagtcctgagcccttgaagtagacacagtgatgtcaccct 666

                                                                       
Query: 121 gttccatatggcatggaaaaatattagtgtcagtcacaccttgagatccttaaactgctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gttccatatggcatggaaaaatattagtgtcagtcacaccttgagatccttaaactgctg 606

                                                                       
Query: 181 ttgccccacagtctgtccaatggcctctggcttacagaaacctcagcccaagtatttcat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ttgccccacagtctgtccaatggcctctggcttacagaaacctcagcccaagtatttcat 546

                                                                       
Query: 241 cttctcctagaaggaatggccacagatgggcttcagccatatggagcaggctagtcacag 300
           || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 545 ctactcctagaaggaatggccacagatgggcttcagccatatggagcaggctagccacgg 486

                                                                       
Query: 301 gtcctgtctcccagaccctgggcatgctttggcggaggaactgatacggctatctccctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gtcctgtctcccagaccctgggcatgctttggcggaggaactgatacggctatctccctt 426

                                                                       
Query: 361 ctggacatggttgtttgctgtcaatcctggggcgcctggcctggcctgtagcctctggtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctggacatggttgtttgctgtcaatcctggggcgcctggcctggcctgtagcctctggtg 366

                                                                       
Query: 421 agcagccttctagccctgggatagacacaagtaacttgaacctctcaccttccatctcca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agcagccttctagccctgggatagacacaagtaacttgaacctctcaccttccatctcca 306

                                                                       
Query: 481 cttacctttgcatatcccaagcgccagagacctggcccttttggtggttaataactttta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cttacctttgcatatcccaagcgccagagacctggcccttttggtggttaataactttta 246

                                                        
Query: 541 ataaagtgggaagaagaagaagaaaaaaaagaataaaccgacttt 585
           |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 245 ataaagtgggaagaagaagaagaaaaaaaagaataaacagacttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space:   560625
Effective search space used:   560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)