NCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXATTTCGAAATGGATCC
GCGGAATTCTTTGTTACTAAAACAGCGCCATTTTTTAATGGGGTTATTTG
ATTTTCTGAAGTCCACCTTCTTGCGTTCTTTTTATATGTTGGATATTAGT
CCCCTATGTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGG
TCTTTTTGTCTTATTGACAGTGTCATTTGCCTTGCAGAAACTTTGGAGTT
TCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCT
GTTCTGTTCAGGAATTTTTCCTCNGTGCCCATATCTTCAAGGCTTTTCCC
CACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCT
TGATCCACTTAGATTTGACCATAGTACAAGGAGATAAGTATGGATTGATT
CGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCAACAATTGTTGAA
AATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCA
AGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCAT
TGGTCTACTGGTCTGTCTCTATACCAGTCCCATGCAGTTTTTATCCCAAT
TGCTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTC
TTTTATCCTTGAGAAGAGTTTCTTGCTATCCTAGGTTTTTTGTTAN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGTTATGTGCCTTGCACTGTGATCTG
TTCAAGGACAAGGCCTGATGAAGTCTAAACTGAATGGCATATAACTTTCA
TGTCTTAAATGAATTGTTACACCCATCTTCTATTTCGATTTGTGATGTCT
TTTTTAATGGTCAGGTGATTTTTGCTACATTTCAAGAATGTGTAGCTTAT
TAAAAGATCCAGATGGAATGAGTGGACCTTAATTCTTTCTATTTTGAGGA
AATTCCTTTACCAAGAGTCTTGGCTACTATGCAATCTCCATGGCATCTTC
CTGATTCAATTAGATTTAACATCTCTATGATTACTGCCCTTCAGATACAT
TTTATCTGCAGATAGACCTGTAGCTTAGTCTTTCAATTTATCCTTCTTCA
TTTCTTTTGTTTTCTATTTCCTGGGCAGTGTTTCAGTATGCCAAATTAGA
ATAATATACTTCATTATATTTGAAGCATGAGAGAGGAAAATAAATATTGG
CTGTGTAAAATTAAAAGCAAAGACACACCATACACCAAATCTCATCCTCT
CTGCAGCTTGCAAATGGCACAATAGTAAGTGATGTACTTTGGCATTTGTG
ACTAAAGGACAGAACAGATGGTAAACTTTCATTTGAAATTAANAGACAGA
AAATATTTACTTAAAAGAATTGTGGTGCCAAGTCGTAAT

Query= MSMg01no484_o11.g1 MSMg01no484_o11.g1 CHROMAT_FILE:
MSMg01no484_o11.g1 PHD_FILE: MSMg01no484_o11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:38 2005
         (643 letters)



>mm_chr4_51461193_51462232
          Length = 1040

 Score = 1172 bits (606), Expect = 0.0
 Identities = 633/643 (98%), Gaps = 3/643 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agttatgtgccttgcactgtgatctgttcaaggacaaggcctgatgaagtctaaactgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttatgtgccttgcactgtgatctgttcaaggacaaggcctgatgaagtctaaactgaa 260

                                                                       
Query: 61  tggcatataactttcatgtcttaaatgaattgttacacccatcttctatttcgatttgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcatataactttcatgtcttaaatgaattgttacacccatcttctatttcgatttgtg 320

                                                                       
Query: 121 atgtcttttttaatggtcaggtgatttttgctacatttcaagaatgtgtagcttattaaa 180
           ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 atgtcttttttaatgctcagatgatttttgctacatttcaagaatgtgtagcttattaga 380

                                                                       
Query: 181 agatccagatggaatgagtggaccttaattctttctattttgaggaaattcctttaccaa 240
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatccagatggaatg-gtggaccttaattctttctattttgaggaaattcctttaccaa 439

                                                                       
Query: 241 gagtcttggctactatgcaatctccatggcatcttcctgattcaattagatttaacatct 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gagtcttggctacaatgcaatctccatggcatcttcctgattcaattagatttaacatct 499

                                                                       
Query: 301 ctatgattactgcccttcagatacattttatctgcagatagacctgtagcttagtctttc 360
           ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 500 ctatgattactgcccttcagatacattttatctgca--tagacctgtagcttagtctttc 557

                                                                       
Query: 361 aatttatccttcttcatttcttttgttttctatttcctgggcagtgtttcagtatgccaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aatttatccttcttcatttcttttgttttctatttcctgggcagtgtttcagtatgccaa 617

                                                                       
Query: 421 attagaataatatacttcattatatttgaagcatgagagaggaaaataaatattggctgt 480
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 618 attagaataatatacttcattatatttgaaggatgagagaggaaaataaatattggctgt 677

                                                                       
Query: 481 gtaaaattaaaagcaaagacacaccatacaccaaatctcatcctctctgcagcttgcaaa 540
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 678 gtaaaattaaaagcaaagacacaccatataccaaatctcatcctctctgcagcttgcaaa 737

                                                                       
Query: 541 tggcacaatagtaagtgatgtactttggcatttgtgactaaaggacagaacagatggtaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tggcacaatagtaagtgatgtactttggcatttgtgactaaaggacagaacagatggtaa 797

                                                      
Query: 601 actttcatttgaaattaanagacagaaaatatttacttaaaag 643
           |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 798 actttcatttgaaattaaaagacagaaaatatttacttaaaag 840


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1040
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1030
Effective search space:   651990
Effective search space used:   651990
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)