NCCTCCCTTCNNNTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXCGCGGAATTCTCACCCAAGGAATACCAAATGGCTGAGAAAT
ACCTGAAAAATGTTCAGCANTCTTTAAACATCAGGGAAATGCAAATCAAA
ACAACCCTGAGATTCCATTTCACACCATTCAGAATGGCTNAAGATCAAAA
ATTCAGGTGACAGCAGATGCTGGTGAGGATGAGAAGAAAGAAAATCACCC
CTCCCATTGGTTTGGTGGAATTTGCAGTTTGTANCAACCACTCTGGGAAA
ATCCAGTCTGGGCGGTTTCTTCCAAAAAATGGGACATAAGACCTACCCGA
AGGAATCCCGGCAAAACTCCTCCCGGGGAATTCCCCAAAAAATGGTCCCC
AATTGGGTAAAAAAAGGGCCCCATGGGGCCCCCACACTAATGGTTTCTTA
AAGACCCCCCTTTTTTTTTTTTTTATAAACCCCCCCAAAAAAAGGGTGGG
GAAAAAAAAAACCCCCAAAAAAGGCCCTCCTTTCCACACAAAAAAAAGGG
GGGGGGTTCCCCCCCAAACAAAAGGTGGGGGGGCTTTTTTTTTCTCCCCC
CGGGGGGGGGGGGCACCCCCCCCCCCCCCCCTCTTTTTTAAAAAAAAAAA
AAAAAAAATAATTTTTTTGAGAAACCAATCTCCCTCCTCGGAAGAG

NNNTTCATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTTTTTATGAACAGTCTTCT
GACAAAGGTGTCAAGCTTTTCTGCTACGTTTAAACACTTAAAAAGAAAAC
CCACAAAGACACCCGGGTTCCTCTCCACTCCATGCAGAAGGGGGACCCAG
ACATTAAGGAACTCAACAAGCCAAAATTCTAAATGAGTAGTTGCTGTTCC
CTGCCTCCTTTCTCTCCTAAGCTTCTAAACACTCCCTACCCATTATCACC
TTCCTATCTCTCTGCATGTGCATTTACCTTCTTCTCAACAGGACTGACAG
TGACTTTGAGAAACACTGTAGGTGATGAACACTGCGGCAGGATGACAAAT
CCCCTGACCCACCGCTTTCCTGATCCCCGTCAACCTAAGCACCCTTCACC
GTCCACAGCAAATGTGATTAAGTGGGGCAACTTGAGAAGAGGATGCTCCT
GGATTATCCACATGTGCCGGGTACGATCACTACTGTGCTTAGTAAGCAGG
AGGCAGGAGAGCCAGCGTCAGTAACAGAGGGAAGTGCGGCCAGCTCAAAG
TACACAGGAAGATGCTCACCCAAGAGAGAACATAAACAGGCTCGGAAGAC
TGAAGAAAGATGAGGAAACCGACTCTCTTCTCAGAGCAGCCAGAGAAGAA
ACCGCTTGCCAGTGCCCTGACGTTGACGTAACTTTGGACTTTTAACTCC

Query= MSMg01no485_b04.g1 MSMg01no485_b04.g1 CHROMAT_FILE:
MSMg01no485_b04.g1 PHD_FILE: MSMg01no485_b04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:53 2005
         (602 letters)



>mm_chr4_49615206_49616207
          Length = 1002

 Score = 1071 bits (554), Expect = 0.0
 Identities = 572/578 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   actttttatgaacagtcttctgacaaaggtgtcaagcttttctgctacgtttaaacactt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 actttttatgaacagtcttctgacaaaggtgtcaagcttttctgctacgtttaaacactt 519

                                                                       
Query: 61  aaaaagaaaacccacaaagacacccgggttcctctccactccatgcagaagggggaccca 120
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 aaaaagaaaacccaaaaagacacccgggttcctctccactccatgcagaagggggaccca 459

                                                                       
Query: 121 gacattaaggaactcaacaagccaaaattctaaatgagtagttgctgttccctgcctcct 180
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gacattaagcaactcaacaagccaaaattctaaatgagtagttgctgttccctgcctcct 399

                                                                       
Query: 181 ttctctcctaagcttctaaacactccctacccattatcaccttcctatctctctgcatgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttctctcctaagcttctaaacactccctacccattatcaccttcctatctctctgcatgt 339

                                                                       
Query: 241 gcatttaccttcttctcaacaggactgacagtgactttgagaaacactgtaggtgatgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gcatttaccttcttctcaacaggactgacagtgactttgagaaacactgtaggtgatgaa 279

                                                                       
Query: 301 cactgcggcaggatgacaaatcccctgacccaccgctttcctgatccccgtcaacctaag 360
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 278 cactgcggcaggatgacaaatcccctgacccactgctttcctgatccccgtcaacctaag 219

                                                                       
Query: 361 cacccttcaccgtccacagcaaatgtgattaagtggggcaacttgagaagaggatgctcc 420
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 218 cacccttcaccgtccacagcaaatgtgattaagcggggcaacttgagaagaggatgctcc 159

                                                                       
Query: 421 tggattatccacatgtgccgggtacgatcactactgtgcttagtaagcaggaggcaggag 480
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tggattatccacatgtgccaggtacgatcactactgtgcttagtaagcaggaggcaggag 99

                                                                       
Query: 481 agccagcgtcagtaacagagggaagtgcggccagctcaaagtacacaggaagatgctcac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  agccagcgtcagtaacagagggaagtgcggccagctcaaagtacacaggaagatgctcac 39

                                                 
Query: 541 ccaagagagaacataaacaggctcggaagactgaagaa 578
           ||||||||||||||||||||| ||||||||||||||||
Sbjct: 38  ccaagagagaacataaacaggatcggaagactgaagaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space:   587264
Effective search space used:   587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)