TGGCTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCAGAGGAT
CCGCGGAATTCTTTGTTCTGCCCTGAGCCCCATTTTTTAATGGGGTTATT
TGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTTTTTTTTTTTAAGACTT
TTGCAAAGTCTACCTTTTTCCTTTTTTTTCCATTTTTATTAGGTATTTAG
CTCATTTACATTTCCAATGCTATACCCCCATACCCACCCACCCCCACTCC
CCTACCCACCCACTCCCCCTTTTTGGCCCTGGCATTCCCCTGTACTGGGG
CATATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGAC
TAGGCCATCTTTTGATACTTATGCCGCTAGAGTCAAGAGCTCTGGGGTAC
TGGTTAGTTCTTAATGTTGGTCCACCTATAGGGTTGCATATCCCTTTAGC
TCCTTGGGCACTCTTTCTATGTCCTCCTTTGGGAGCCCTGGGATCTATCC
ATTAGGTGACTGTGAGTATCCGTTTTTGTGTTTGCTAAGCCCCGGGATAG
TGTCACAAGAGACAGTTTCGTTTGGGGCCCTTTCGATAAAAACCCAGCAT
GTGGTATGCTTATGGTGGTCAGCCCTTTTAATACCGTGTTATTGGGGTGG
AATTCCTGGTATTTGGGTATGGCTTAGATAATGGCCACATCCTTTTTTTT
TCAGCGATCTTAAGTATTGGTCATTTGTGAAATTTTTTGCCTTGGGGTGT
ATTGAGTTN

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCACAACTCATGCTGGCCATG
TCTGTGAAAAAAAAATGTGTTGTCTGAAACTAAAACAATATCCAGAAAAC
TGTAGCATTAATATAACAACTAACATCGGAGATATTTACATTAGAATACT
TGGAGAATTTCACCACTAAGAGAGGCATCAGTTCTCACTGTAATTATTAG
GTAGTGCTTTCATGATCATAGGTGCTATTTATATTATTATGTAAAATACA
TCTTACAAAAACTATTGTTATAAGCATAGATACTTGTCTTGTCAGAAATA
ATACCAGGTAAAGAATCTATAAATCTGACTTTATTTTAAATACTTGGAGT
ATTTGGAAATATTCATTAGAAAATAGCCAATGAATCACTAAAGACGTACA
ATCATCTTCTAAATAGTGTGTTTCATTTCCCAGAATCTCTTGGTCATTCA
TTTAAATTTCTGGTGTCTTTAATCTGTGGCGGTTTTAATAGAAACTGAGA
TGTTCCATTACACAAGCAAGTAAGCCACGTCTATCTGTAGGTTTGTGAGT
CATGTAAGTGAATGAATGTAGTATGGAGGTTTTAATGTTATAAATTCCAA
TCATTATCTAAGCTTCAGAATATCAGGGATGTGTTTGTAAACATTAAAGA
TTAATCTGGGATATGATTGTTAATCCCTACCTGACTGGNTTTA

Query= MSMg01no485_n11.g1 MSMg01no485_n11.g1 CHROMAT_FILE:
MSMg01no485_n11.g1 PHD_FILE: MSMg01no485_n11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:57 2005
         (589 letters)



>mm_chr4_36825989_36826972
          Length = 984

 Score =  957 bits (495), Expect = 0.0
 Identities = 565/591 (95%), Gaps = 9/591 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccacaactcatgctggccatgtctgtgaaaaaaaaatgtgttgtctgaaactaaaacaat 60
           ||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 784 ccacaactcattctggccatgactgtgaaaaaaaaatgtattgactgaaactaaaacaat 725

                                                                       
Query: 61  atccagaaaactgtagcattaatataacaactaacatcggagatatttacattagaatac 120
           |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 724 atccagaaaactatagcattaacataacaactaacatcagagatatttacattagaatac 665

                                                                       
Query: 121 ttggagaatttcaccactaagagaggcatcagttctcactgtaattattaggtagtgctt 180
           |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 664 ttggagaatttcaccactaagagaggcagcagttttcactgtaattattaggtagtgctt 605

                                                                       
Query: 181 tcatgatcataggtgctatttatattattatgtaaaatacatcttacaaaaactattgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 604 tcatgatcataggtgctatttatattattatgtaaaatacatcttacaaaaactactgtt 545

                                                                       
Query: 241 ataagcatagatacttgtcttgtcagaaataataccaggtaaagaatctataaatctgac 300
           |||||||||||||     ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ataagcatagata-----cttgtcagaaataataccaggtaaagaatctataaatctgac 490

                                                                       
Query: 301 tttattttaaatacttggagtatttggaaatattcattagaaaatagccaatgaatcact 360
           |||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct: 489 tttattgtaaatacttggaatatttggaaatatttattagaaaatagccaatgaatca-t 431

                                                                       
Query: 361 -aaagacgtacaatcatcttctaaatag-tgtgtttcatttcccagaatctcttggtcat 418
            ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||
Sbjct: 430 gaaagacgtacaatcatcttctaaatagct-tgtttcatttcccagaatctcttgggcat 372

                                                                       
Query: 419 tcatttaaatttctggtgtctttaatctgtggcggttttaatagaaactgagatgttcca 478
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tcatttaaatttctgttgtctttaatctgtggcggttttaatagaaactgagatgttcca 312

                                                                       
Query: 479 ttacacaagcaagtaagccacgtctatctgtaggtttgtgagtcatgtaagtgaatgaat 538
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 311 ttacacaagcaagtaagccacgtctatctgtaggcttgtgagtcatgtaagtgaatgaat 252

                                                              
Query: 539 gtagtatggaggttttaatgttataaattccaatcattatctaagcttcag 589
           |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 251 gtagtatggaggttttaatgatataaattccaatcattatctaagcttcag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 984
Length adjustment: 10
Effective length of query: 579
Effective length of database: 974
Effective search space:   563946
Effective search space used:   563946
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)