NGGGGACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTCAACTGTTGCTTATCAAATAGCCAAAAAGCACCTAAA
GATGTGTTCAACATATTTTCATCAGAGAAATGCAAATCAAAATGACTCTG
AGACTCTACCTCAACACCAGTCAGAAAGGTAAGATCAAAAACTCAGGTGA
ATCCTTTGATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGT
GTTCTTCTTGAGTTTCATGTGTTTAGCAAATTGTATCTTATATCTTGGGA
ATCCTAGGTTTGGGGCTAATATCCAGGGATCCACCCCATAATCAGCATCC
AAACGCTGACACCATTGCATACACTAGCAAGATTTTATCGAAAGGACCCA
GATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAG
TGGATGCTCACAGTCAGCTAATGGATGGATCACAGAGCTCCCAATGGAGG
AGCTAGAGAAAGAACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTG
GAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGC
ATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCA
TTGGACACGCAAACTGTTTATGCCCCAGTACAGGGGAACGCCAGGGCCAA
AAAGGGGGAGTGGGTGAGTAGGGGAAN

CAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTTGGACAACCGGATCCTTCTACGG
CAAAGCTTTTATTGCTTCAACATAAGGAAGACCCCGAACCTGGAGAATGG
CGCTGCTTATATAGCCCGCAGCGTGACGTTTCAGCACCTGATGTAGCGTG
ACAGCACCTGATTAGTTGCTCGCCCATCACCCCATTACTATGCCCTGAGA
TGGGCAGTGACTGGGTGTGAATTTACTCTTGCACTTGCGCATAAGGCTTG
TTTACTAGTTAGGCGCAGTGTAAGCCAGCACCATCTTATAATGGCGATTG
CTCACAGCACGGCTCTCCACAGAAAACACGCAAAATTAGACAAATTGTAT
GTCAAAATGTTTAAAATTTAGATAGTTTTGGTAGTTGTATATGATAATTT
ACGAATTACTCTTATACTTGATTTTAAGTTGAGTGATAATACCTTTTACT
GAAATGTGTTGAAGTAGAATATGAACCTTATAGTATCAAAGACAAGACTT
TGTGCCAGCATAGCACGTTGTAATTGTAAAATAGTTCAAATGATGCAATA
ATGGTAAATCTAGAATGTTTTGTTTGGTAAATTTGGAACCATCTGTCAGA
CTTTGCTTTTCTTGTGGTAGAGATTGAGCTAGGGCACTAGCTATACTCAG
GAAGCACTTTGACTGTGAGCTACATACCTATCCTCTAAAGACAGTCTCAA
AGCCTT

Query= MSMg01no486_f15.g1 MSMg01no486_f15.g1 CHROMAT_FILE:
MSMg01no486_f15.g1 PHD_FILE: MSMg01no486_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:38 2005
         (569 letters)



>mm_chr4_17178530_17179498
          Length = 969

 Score = 1036 bits (536), Expect = 0.0
 Identities = 564/578 (97%), Gaps = 10/578 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   acttggacaaccggatccttctacggcaaagcttttattgcttcaacataaggaagaccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 acttggacaaccggatccttctacggcaaagcttttattgcttcaacataaggaagaccc 252

                                                                       
Query: 61  cgaacctggagaatggcgctgcttatatagcccgcagcgtgacgtttcagcacctgatgt 120
           |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cgaaccaggagaatggcactgcttatatagcccgcagcgtgacgtttcagcacctgatgt 312

                                                                       
Query: 121 agcgtgacagcacctga--------ttagttgctcgcccatcaccccattactatgccct 172
           |||||||||||||||||        ||||||||||||||||||||||||||||| |||||
Sbjct: 313 agcgtgacagcacctgagcacctgattagttgctcgcccatcaccccattactacgccct 372

                                                                       
Query: 173 gagatgggcagtgactgggtgtgaatttactcttgcacttgcgcataaggcttgtttact 232
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 373 gagatgggcagtgactgggtgtgaatttactcttgcacttgcacataaggcttgtttact 432

                                                                       
Query: 233 agttaggcgcagt-gtaagccagcaccatcttataatggcgattgctcacagcacggctc 291
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agttaggcgcagtag-aagccagcaccatcttataatggcgattgctcacagcacggctc 491

                                                                       
Query: 292 tccacagaaaacacgcaaaattagacaaattgtatgtcaaaatgtttaaaatttagatag 351
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tccacagaaaacacgcaaaattagacaaattgtatgtcaaaatgtttaaaatttagatag 551

                                                                       
Query: 352 ttttggtagttgtatatgataatttacgaattactcttatacttgattttaagttgagtg 411
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttttggtagttgtatatgataatttacgaattactcttatacttgattttaagttgagtg 611

                                                                       
Query: 412 ataataccttttactgaaatgtgttgaagtagaatatgaaccttatagtatcaaagacaa 471
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ataataccttttactgaaatgtgttgaagtagaatatgaaccttatagtatcaaagacaa 671

                                                                       
Query: 472 gactttgtgccagcatagcacgttgtaattgtaaaatagttcaaatgatgcaataatggt 531
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gactttgtgccagcatagcacgttgtaattgtaaaatagttcaaatgatgcaataatggt 731

                                                 
Query: 532 aaatctagaatgttttgtttggtaaatttggaaccatc 569
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 732 aaatctagaatgttttgtttggtaaatttggaaccatc 769


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space:   536081
Effective search space used:   536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)