XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCATCT
TAACTTAACTGAAGCCACATTGAATCAGTCGTCTTGAAAGATTAGATAGG
AAGGAGGGTATACGCTTTCAGGCCTAGGGCTAGGGGTAGCTAGAACAGAG
AAAGAAACATTCTAGGATCAGCCTAAGCCATGCAGTCACAGGACAAAGGT
ACAGCTCCTTTCTCATCTCTTCATTCATCGAAATAAGGATAACATGTGCA
GTTGTTAAACCATCTGGGCATAATTGTATGACAGTATTGCTATTGTGATG
TTCTCATTCCCATGTACACCTCCCTTCTGTGGTTAGTTTTTTAATGTGAA
TCAGATTTGACTGTACATCACAGGAAATACCTGCTTCCTTCATTTTATAG
GTATCACACTAACTGTTTTATCATCTAACTTAAGGTGAAAAAAAATTAAA
CATTAACAACCTCACATAAAGAATGTGGTATATTCTAAAATGTGTATAAA
ATTATTAAATCATATTGCCGTAATTATCTCAAAACAAATTTCTAATATTT
TCTTTAAAAGTGAAAATGCTAAACTTTTGTTAATCAATACAGCCTGTCAG
CAGCATATGTGATTTAGAAATAAAATTGAAATATATTTTGAGCCAGAAAT
ATGCTGCAGTGTTAGATGACTTGTCTAGCATTCCAAAGAACCTGATTTTG
ATCTAAATAATCACAAATG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACAA
AAAGAAGTCCAACATAGATTCAAAATTTCAGAGCTTGTGGATATTAGGCA
AAAAGCTCAGAATACCCACAATAAAACTCACAGGCTATATGAAGCCTAAG
AAGCAGAAAGACCAATGTGCAGATGCTTCAATACTACTTAGAAGGGGTAT
CAAAATAATTATGGGAGGTAGATGGTGGGAGGGACTTGGGAGGAAGAGAG
GAGGGGAAGAGGAAAAGGNNNNNNNANNNNNGNNNNNGNGGNGAGGGGTT
TAACTAAATTTAAAAGAAAGAGAAGGGAGAAGAAGGAGGATTTTTTTCCC
CCCAAANNGAGAGGGGGAGGTGGANTGAGTATTATTTTTTTTTTTTTTCC
CCCCCCTTTTTTTTTTTTTTTGTTCCCCTATGGGTGACAATTCGCGCTTT
GATTAAAACGCAATTGTATCTGCCTTTCTCGGTACCTGTTAAATACCTTA
CTAATTCCCTACGCGTTATTTCCGACCTCCCTTAAAAGATAATGACTTAT
TTATGATATGCGCCTCCATTTTTNTTGTGGCTTTTTTGAGAACGCTCAAC
TATGCGGTACTCTTTGATGGTGTTTTAGTTTGCTCCTTCTTAGCAGACCC
GACGACGAAAACGGTTTTTTTTTTTTTTTCTATACCATGCCAGATCTGTT
TTGCCTCAATATTACTCATTCATGCAGCCCTTTGGGCC

Query= MSMg01no488_g22.b1 MSMg01no488_g22.b1 CHROMAT_FILE:
MSMg01no488_g22.b1 PHD_FILE: MSMg01no488_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:21 2005
         (659 letters)



>mm_chr4_37861153_37862211
          Length = 1059

 Score = 1183 bits (612), Expect = 0.0
 Identities = 648/660 (98%), Gaps = 2/660 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgaagccacattgaatcagtcgtcttgaaagattagataggaaggagggtatacgcttt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 ctgaagccacattgaatcagtcgtcttgaaagattagataggaaggagggtataagcttt 260

                                                                       
Query: 61  caggcctagggctaggggtagctagaacagagaaagaaacattctaggatcagcctaagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggcctagggctaggggtagctagaacagagaaagaaacattctaggatcagcctaagc 320

                                                                       
Query: 121 catgcagtcacaggacaaaggtacagctcctttctcatctcttcattcatcgaaataagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgcagtcacaggacaaaggtacagctcctttctcatctcttcattcatcgaaataagg 380

                                                                       
Query: 181 ataacatgtgcagttgttaaaccatctgggcataattgtatgacagtattgctattgtga 240
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaacatgtgcagttgttaaaccatctgggcataattgtatgacagtattgctattgtga 440

                                                                       
Query: 241 tgttctcattcccatgtacacctcccttctgtggttagttttttaatgtgaatcagattt 300
           ||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||
Sbjct: 441 tgttctcattcccatgtacacctcccttcggtggttagttttt-aacgtgaatcagattt 499

                                                                       
Query: 301 gactgtacatcacaggaaatacctgcttccttcattttataggtatcacactaactgttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 500 gactgtacatcacaggaaatacctgcttccttcattttataggtatcgcactaactgttt 559

                                                                       
Query: 361 tatcatctaacttaaggtgaaaaaaaattaaacattaacaacctcacataaagaatgtgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tatcatctaacttaaggtgaaaaaaaattaaacattaacaacctcacataaagaatgtgg 619

                                                                       
Query: 421 tatattctaaaatgtgtataaaa-ttattaaatcatattgccgtaattatctcaaaacaa 479
           ||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||
Sbjct: 620 tatattctaaaatgtgtataaaaattattaagtcatattgtcgtaattatctcaaaacaa 679

                                                                       
Query: 480 atttctaatattttctttaaaagtgaaaatgctaaacttttgttaatcaatacagcctgt 539
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atttctaatattttctttgaaagtgaaaatgctaaacttttgttaatcaatacagcctgt 739

                                                                       
Query: 540 cagcagcatatgtgatttagaaataaaattgaaatatattttgagccagaaatatgctgc 599
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 740 cagcagcatatgtgatttagaaataaaattgaaatagattttgagccagaaatatgctgc 799

                                                                       
Query: 600 agtgttagatgacttgtctagcattccaaagaacctgattttgatctaaataatcacaaa 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 800 agtgttagatgacttgtctagcattccaaagaacctgattttgatctaaatcatcacaaa 859


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space:   680801
Effective search space used:   680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)