ATTTTCTACTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTCCACAGA
TCCGCGGAATTCTTTATCTACCGAAAGGATACCTGGNGTTTTACACGGTC
TAAAAGCCTCAAAGCTTTGGCTTGAATGGTGCCCAAACATGAAGCAGAAA
GCAGTGAGTTTGATCTAAAATCCATAAAATCAAAAGTTTGACTGACCACA
AACCCTATATTTTACCATCTAACTGTGAATTGCGGTTGGAAATAAAGTAT
TGCTTTCATCCCTTTCATCCAACATTTTGAAGGACATTTGAGGACCTGAT
TTATGGTTTTGAGAACCTAAGTGTTTATGTTAACAAGTAAAGAAAAATTC
AATCACACAGTTGCATATGCTTCTTCAAAGGCACGCCTTTAGTCCCCAGT
GCTCCTGTTGAACTTTTTCATTAAATGGTTGTGCCTAGATTATATGGCCC
AGAGAGGAGAATTCTTTCCAGTCTGGGGTTTTAACCAATGTGGTTTAGCA
AAATTGCCCTATGTTCTGACAATTTATACTGTAAATCTAAAGTATAGATT
ATGGCCATGATTCATTTAATTCACATGCTGCAAATATATTTGAAAAAAGC
CTGTCTAAGATGGAGAGAATGAACAGACACTCATGGCGAGGTTTTCTTAC
AAGATAGCACATCATTTTGCATAGGAAGATGGAAAAAAGGATTTCATTGC
ATAAACAACAATAATTTCACACTAGTAGCTGGCACAGGAAGCTGG

CGTTTTCTTCAATTAAATGGGATGGNGGGGGGGGGNCTGTTTTCGGGACA
GGGGGNNGANNNANNGAAGTTACCAAAAAGAGGGGGNNNGAGGAAGANNG
AAAGGAGGAGAAGGACTGGAAAACGTGGCAAGCACCCTTAAGCATCAGGG
AAATACCAAGCACAACAAGCTTGAGATTCCACCTCACACCAACCAGAATG
GCTAAGAGCAAAAAGTCAGGTGATAGCACATGCCGGTGAATATGTGGAGA
AAGAGTTTACTCCTCCATTGGTGGCGTGATTGCGAGCTTGTACATCCAGT
CTGGAAATCAGTCTGGTGGTTTTTTTTTTTTTGGACAGAGTATTACTTTT
AGTATCCTGCAATATTTTTCCTGGGACAACAGGCCGAAGATGTCCCTTAC
GGTAAGTAGGATTCATGCTCCACCCACTTGTTTTCTTCCCGCACCTATTA
TAGTCGGAAGTCTGGATTTGTCCCCGATGCCGCTTATTCGCGCGAATGTG
TACGCGAGACAGTTGCTCACTTGGCAGCTCTGTAGGTATGATTACGTGAC
GTACCGTGCACCGCACTCCGTTAAAAACTTCTAGCTTCACTGCCCCGCAC
CCATTTTGTTTTTTTTTCTTATTAGCTATGTAAAACCCCCGCGCATTCGT
TACCCATTTGCTTTTGTTTATGGCCCCCCTTAGGATTATAATGGATTGGG
GATTTCAGTTGAACTGTTTGGATATGTTGTGAGCGTAAAGTAGAAGGGCT
GGTGTCGAAGACACCCAGTAGATC

Query= MSMg01no489_l07.b1 MSMg01no489_l07.b1 CHROMAT_FILE:
MSMg01no489_l07.b1 PHD_FILE: MSMg01no489_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:02 2005
         (591 letters)



>mm_chr4_27562522_27563512
          Length = 991

 Score = 1075 bits (556), Expect = 0.0
 Identities = 582/591 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   acctggngttttacacggtctaaaagcctcaaagctttggcttgaatggtgcccaaacat 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctggtgttttacacggtctaaaagcctcaaagctttggcttgaatggtgcccaaacat 260

                                                                       
Query: 61  gaagcagaaagcagtgagtttgatctaaaatccataaaatcaaaagtttgactgaccaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagcagaaagcagtgagtttgatctaaaatccataaaatcaaaagtttgactgaccaca 320

                                                                       
Query: 121 aaccctatattttaccatctaactgtgaattgcggttggaaataaagtattgctttcatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaccctatattttaccatctaactgtgaattgcggttggaaataaagtattgctttcatc 380

                                                                       
Query: 181 cctttcatccaacattttgaaggacatttgaggacctgatttatggttttgagaacctaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 cctttcatccaacattttgaaggacatttgaggacctgatttatggttttgagaaactaa 440

                                                                       
Query: 241 gtgtttatgttaacaagtaaagaaaaattcaatcacacagttgcatatgcttcttcaaag 300
           ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtggatgttaacaagtaaagaaaaattcaatcacacagttgcatatgcttcttcaaag 500

                                                                       
Query: 301 gcacgcctttagtccccagtgctcctgttgaactttttcattaaatggttgtgcctagat 360
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcatgcctttagtccccagtgctcctgttgaactttttcattaaatggttgtgcctagat 560

                                                                       
Query: 361 tatatggcccagagaggagaattctttccagtctggggttttaaccaatgtggtttagca 420
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 tatatggcccagagaggagaattctttccagtctgggtttttaaccaatgtggtttagca 620

                                                                       
Query: 421 aaattgccctatgttctgacaatttatactgtaaatctaaagtatagattatggccatga 480
           |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 621 aaattgccctatgttctgacaatttatactgtaaatctaaaggaaagattatggccatga 680

                                                                       
Query: 481 ttcatttaattcacatgctgcaaatatatttgaaaaaagcctgtctaagatggagagaat 540
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 681 ttcatttaattcacatgctgcaaatatatttgaaaaaggcctgtctaagatggagagaat 740

                                                              
Query: 541 gaacagacactcatggcgaggttttcttacaagatagcacatcattttgca 591
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaacagacactcatggcgaggttttcttacaagatagcacatcattttgca 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space:   569961
Effective search space used:   569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)