AAGGGACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAGGAT
CCGCGGAATTCTCACCTTTCCAATACCGAATGGCAGAGAAGCACCTGAAA
AAATGCTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCT
GAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTG
ACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGT
TGGTGGGATTGCAGGCTTGTACAACCACTCTGGAGATCAGTCTGGCGGTT
CCTCAGAAAACTGGATATAGTACTATTGGAGGATCCAGCAATACCTCTCC
TGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCC
ACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAGGAACC
CAGATGCCCCTCAACAGAGGAATGGATACAGAAGATGTGGTACATCTACA
CAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTG
GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTC
ACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCA
AAACCTAAGATACCCAAGATATAAGATACAATTTCCTAAACACATGAGAC
TCAAGAAAAATGAAGACTGAAGTGTGAACACTATGCCCCTCCTTAGAAGT
GG

TTTTTCACTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTAGAGATCCAAGTTT
TAAGGGTTTGCATTCAGAAGCTAAGTTCCAGTGCAATCACCTAGGATGGG
ATCTAGATCTAACCAGTACCTGGGCTATACACAGTACAGTAATCAGTACC
TGGGCTATACACAGTACAGTAATCAGTACCTGGGCTATACACAGTACAGT
AATCAGTACCTGGGCTATACACAGTACAGTAATCAGTACCTGGGCTATAC
ACAGTACAGTAATCAGTACCTGGGCTATATACTTGTACAGTAATCAGTAC
CTGAGCTATACACAGTACAGTAATCAGTACCTGGGCTATACAGAGTACAG
TTCTTCGCTACATGCCTCTCTTCTGAGCAATAGTGGCAAATAGTGAAATC
GCTTCCTCAGCCAGACAATTTGATGCCACTAGGAATGACTCTCTTGGAAA
AAAAAAAGTGAGAGAAACCCTCTAGCCCCAGAGGGACAGCTCCAACTCTA
TGTCATGTTTTAAAATGCCTCAGATATCTATAGAACATTTCATCCTAAAA
TAAAAGAATATACCTTCTTCACAGAACTTCATGGTACCTTCTCCAAAATT
AATCATATAGTCATAAAACAGGCCTCAACAGATAGAAGAAGATTGAAATA
ATTCCATGCATCCCATCAGATCACTACAGACTAAGGCTGGTCTTCAATAG
CAAC

Query= MSMg01no490_c08.g1 MSMg01no490_c08.g1 CHROMAT_FILE:
MSMg01no490_c08.g1 PHD_FILE: MSMg01no490_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:39 2005
         (657 letters)



>mm_chr4_89886964_89888022
          Length = 1059

 Score = 1083 bits (560), Expect = 0.0
 Identities = 622/670 (92%), Gaps = 44/670 (6%)
 Strand = Plus / Minus

                                                                       
Query: 1   actagagatccaagttttaagggtttgcattcagaagctaagttccagtgcaatcaccta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 actagagatccaagttttaagggtttgcattcagaagctaagttccagtgcaatcaccta 937

                                                                       
Query: 61  ggatgggatctagatctaaccagtacctgggctatacacagtacagtaatcagtacctgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 ggatgggatctagatctaaccagtacctgggctatacacagtacagtaatcagtacctgg 877

                                                                       
Query: 121 gctatacacagtacagtaatcagtacctgggctatacacagtacagtaatcagtacctgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 gctatacacagtacagtaatcagtacctgggctatacacagtacagtaatcagtacctgg 817

                                                                       
Query: 181 gctatacacagtacagtaatcagtacctgggctatacacagtacagtaatcagtacctgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 816 gctatacacagtacagtaatcagtacctgggctatacacagtacagtaatcagtacctg- 758

                                                                       
Query: 241 gctatatacttgtacagtaatcagtacctgagctatacacagtacagtaatcagtacctg 300
                                         ||||||||||||||||||||||||||||||
Sbjct: 757 ------------------------------agctatacacagtacagtaatcagtacctg 728

                                                                       
Query: 301 ggctatacagagtacagttcttcgctacatg-----------cctctcttctgagcaata 349
           |||||||||||||||||||||| ||||||||           ||||||||||||||||||
Sbjct: 727 ggctatacagagtacagttctttgctacatgtttcagccatgcctctcttctgagcaata 668

                                                                       
Query: 350 gtggcaaatagtgaaatcgcttcctcagccagacaatttgatgccactaggaatgactct 409
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gtggcaaatagtgaaatcgcttcctcagccagacaatttgatgccactaggaatgactct 608

                                                                       
Query: 410 cttggaaaaaaaaaa--gtgagagaaaccctctagccccagagggacagctccaactcta 467
           |||||||||||||||  | |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 607 cttggaaaaaaaaaaaagagagagagaccctctagccccagagggacagctccaactcta 548

                                                                       
Query: 468 tgtcatgttttaaaatgcctcagatatctatagaacatttcatcctaaaataaaagaata 527
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tgtcatgttttaaaatgcctcagatatctatagaacatttcatcctaaaataaaagaata 488

                                                                       
Query: 528 taccttcttcacagaacttcatggtaccttctccaaaattaatcatatagtcataaaaca 587
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 487 taccttcttcacagaacttcatggtaccttctccaaaattaaccatatagtcataaaaca 428

                                                                       
Query: 588 ggcctcaacagatagaagaagattgaaataattccatgcatcccatcagatcactacaga 647
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ggcctcaacagatagaagaagattgaaataattccatgcatcccatcagatcactacaga 368

                     
Query: 648 ctaaggctgg 657
           ||||||||||
Sbjct: 367 ctaaggctgg 358


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 74
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1059
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1049
Effective search space:   678703
Effective search space used:   678703
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)