NNNATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCACCAGATCTCAACTGACATGAAAGTTTTGATGAAGAATAGA
CACTATGTATGGAAACACAGAGGCTTATTTTTAAAGACAGAGAACCACAT
CCCAGCAGGAGTGGGGCCCTTGTAACACAGTTAAGAGAAGTTATCTGGCC
TTGCTTCGTTTTGCAATTTGTGTGCTTTTTGAGCAGACAGAGTGGGCAGC
TCACTATTTGTTAAGCAGTGACTCATGTAACAGCATTTGAGCTCCATGAG
GCTGGACCTTTGTGGTGCAGGCTCTTTAAGCTCTAGTTGTTTGCTAAGTG
TCACAGGATCTGAAAATCAGGAGATCTTGTTTTTCATTTCTAGCCTTTGC
CTGTGTGTGCCTCAGGCACTTCATGTACCTCCTCCCGATATAATCCTCCT
GACCTCCTGCTTCAGTTTCCAGTGATGACATTATAGATTTGTGTCATCAC
ACCTGCTCCCCCCTTTTTTTACTTTGCTAAGAAGTGAAGAGTAATCTTGA
ACTTCTAATCCTTCTCCCTCTGTCTTCCAAGTGCTGGTACCATATGTGTG
CACCTCCAGTGTAGGTTATACAGTCATGAGGCTTGGTGCATGCTAGGCAA
ATATTTATCAGTGGGGTTATTCTCCAGCCCCATGTGACCTTCTGACAGCT
GAGCAAGGAGTGCTCTTTTGTCTGTTACTATTGAGGTGAAG

NNNAACGATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGATTAGTGGGAAACTGT
TTCAAAAGTAAGGTAAAATTGAGGAAGAAGTTGGACAGGTCTTAGTCCCT
AGGTTTGCCTAGAGCTCTCTATGTAACAGTGACTTCAACTCTTGATCCCC
CTGCCTCAGCCTGGAAAGTGCTATGATTATAGGCCTAAGCCACCAAAGCT
ACCTCATCTTTACTTTATACATTTCTGTATGGTTTGTATTTTTACAGCAA
GGATGCATAGCAGAGATAGCCTCCCCACCCACCCTACCTCTGTATGTATT
GGGGGAGGGGTGTCTGTGCATTTTGAGGCCAGAGGATGTCCTCAGGTGTC
ATTCCTCAGGAGCCATCTTTTTTTTTCTTTTGGTGCAGAGTCTCTCACTG
GCCTGATACTTGAAAAGTAGCCTAAGCTTGTTGGCCAGAGTTTCCAGGGA
CCTGTCTTTCTCTGCTTGCTCAGAGCTAGGATTACAAACACTCGTCACCA
TGCATGGAATTTTTTCCTGGGTACTGAAAATCAAATTCAAGCCCTTGCAC
TTACAAGATAAGCACATTACTAACTACCTAATCCCAGCCCTATGTTGGGT
TATTTATTTACTTACTTGTTTAATTTGTATGAGTGTAGCTTAAATTTTCC
AAACCCTATTTTAAATGATGGNTCTTAAATATTTTAGCCTCCATTCTAC

Query= MSMg01no490_c15.b1 MSMg01no490_c15.b1 CHROMAT_FILE:
MSMg01no490_c15.b1 PHD_FILE: MSMg01no490_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:40 2005
         (668 letters)



>mm_chr4_122466764_122467832
          Length = 1069

 Score = 1050 bits (543), Expect = 0.0
 Identities = 570/579 (98%), Gaps = 1/579 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gacatgaaagttttgatgaagaatagacactatgtatggaaacacagaggcttattttta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gacatgaaagttttgatgaagaatagacactatgtatggaaacacagaggcttattttta 520

                                                                       
Query: 61  aagacagagaaccacatcccagcaggagtggggcccttgtaacacagttaagagaagtta 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 519 aagacagagaaccacatcccagcaggagtggggcacttgtaacacagttaagagaagtta 460

                                                                       
Query: 121 tctggccttgcttcgttttgcaatttgtgtgctttttgagcagacagagtgggcagctca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 459 tctggccttgcttcgttttgcaatttgtgtgctttttgagcagacagagcgggcagctca 400

                                                                       
Query: 181 ctatttgttaagcagtgactcatgtaacagcatttgagctccatgaggctggacctttgt 240
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 399 ctatttgttaagcagtgactcatgtaacagcatttgagctccacgaggctggacctttgt 340

                                                                       
Query: 241 ggtgcaggctctttaagctctagttgtttgctaagtgtcacaggatctg-aaaatcagga 299
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 339 ggtgcaggctctttaagctctagttgtttgctaagtgtcacaggatctgaaaaatcagga 280

                                                                       
Query: 300 gatcttgtttttcatttctagcctttgcctgtgtgtgcctcaggcacttcatgtacctcc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gatcttgtttttcatttctagcctttgcctgtgtgtgcctcaggcacttcatgtacctcc 220

                                                                       
Query: 360 tcccgatataatcctcctgacctcctgcttcagtttccagtgatgacattatagatttgt 419
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tcccgatataatcctcctgccctcctgcttcagtttccagtgatgacattatagatttgt 160

                                                                       
Query: 420 gtcatcacacctgctcccccctttttttactttgctaagaagtgaagagtaatcttgaac 479
           ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 159 gtcatcacacctgctcccccctttttttaatttgctaagaagtgaagagtaaccttgaac 100

                                                                       
Query: 480 ttctaatccttctccctctgtcttccaagtgctggtaccatatgtgtgcacctccagtgt 539
           |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 99  ttctaatccttctccccctgtcttccaagtgctggtaccatatttgtgcacctccagtgt 40

                                                  
Query: 540 aggttatacagtcatgaggcttggtgcatgctaggcaaa 578
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 39  aggttatacagtcatgaggcttggtgcatgctaggcaaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1069
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1059
Effective search space:   696822
Effective search space used:   696822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)