NCCTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCGC
GGAATTCTCATTCTTTCTTTCATTTCCAGCATCATTATCTAGGTACAGCA
CAGATGCAATAGCTGACTGGGGAAAGAGCGACGCCCATTTTGAAATTCAG
GCTCAGCTTCTCATTGATTGGGGGCTTGAAGGTAAATTTTTGCATAAGAG
CAGTGAAGAACGTGAACAGTTCAGATCTTGCTAGTTGTTCTCCAGGGCAA
CCTCTCTTTCCTGAGGAACAAGAAAAAAAGATGAATTACTTTCTCAGTTG
ACATTGGTGCTTCTTAGAACTGGTTTCCCCACCTGCCTACTGCAAACCCT
GACCTGACCTCTTGGCTTTTTGTCCAGTTGATATGTCTATAATTTTGATT
TAGTCATTAGAATCTGAGTTTCACTGATATTTTATGATCCTTGGAATTAC
AATCTTTTTCATTTTTTTTTCATTTGCCAGCCCAGAAAATTGTCATTTCC
CCATGTATCCTGATGCTTTGCATTGAATAATGACCTGTAGAAGGTTAAAC
CTGATTATGAAGCATTCTCATAATTCTAGGAACCATTGTTCTTGGTCACC
TCACACTATACAACACATGCACACTGTATATTCATCAAAGTGTTTGTATA
AACTTTTGTATTTCTTTTTACATACACTTCTGTACCTGTCTTCTCATCAG
CCTCTCTATTCAATATCTGGGTTTATATGGGTAGTCACTAATGATCTAGC
ACTCN

NNCCGATGCTATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAG
AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAATAT
CAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAA
TCAGTCTGGCGGTTCCTCATAAAATTGGACATAGTACTACCGGAGGATCC
AGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGA
AGGACACATGCTCCACTATGTTCATAGCAGCCCTATTAATAATAGCCAGA
AGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAAT
GTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGT
GAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAG
TGGATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTCC
TAAACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGC
C

Query= MSMg01no490_d13.b1 MSMg01no490_d13.b1 CHROMAT_FILE:
MSMg01no490_d13.b1 PHD_FILE: MSMg01no490_d13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:45 2005
         (673 letters)



>mm_chr4_96111081_96112153
          Length = 1073

 Score = 1270 bits (657), Expect = 0.0
 Identities = 669/673 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcatcattatctaggtacagcacagatgcaatagctgactggggaaagagcgacgcccat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcatcattatctaggtacagcacagatgcaatagctgactggggaaagagcgacgcccat 260

                                                                       
Query: 61  tttgaaattcaggctcagcttctcattgattgggggcttgaaggtaaatttttgcataag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgaaattcaggctcagcttctcattgattgggggcttgaaggtaaatttttgcataag 320

                                                                       
Query: 121 agcagtgaagaacgtgaacagttcagatcttgctagttgttctccagggcaacctctctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcagtgaagaacgtgaacagttcagatcttgctagttgttctccagggcaacctctctt 380

                                                                       
Query: 181 tcctgaggaacaagaaaaaaagatgaattactttctcagttgacattggtgcttcttaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctgaggaacaagaaaaaaagatgaattactttctcagttgacattggtgcttcttaga 440

                                                                       
Query: 241 actggtttccccacctgcctactgcaaaccctgacctgacctcttggctttttgtccagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actggtttccccacctgcctactgcaaaccctgacctgacctcttggctttttgtccagt 500

                                                                       
Query: 301 tgatatgtctataattttgatttagtcattagaatctgagtttcactgatattttatgat 360
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 501 tgatatgtctataattttgatttagtcattagaatctgagtttcaccgatatttcatgat 560

                                                                       
Query: 361 ccttggaattacaatctttttcatttttttttcatttgccagcccagaaaattgtcattt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttggaattacaatctttttcatttttttttcatttgccagcccagaaaattgtcattt 620

                                                                       
Query: 421 ccccatgtatcctgatgctttgcattgaataatgacctgtagaaggttaaacctgattat 480
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 621 ccccatgtatcctgatgctttgcattgaataatggcctgtagaaggttaaacctgattat 680

                                                                       
Query: 481 gaagcattctcataattctaggaaccattgttcttggtcacctcacactatacaacacat 540
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 681 gaagcattctcataattctaggaaccattgttcttggtcacttcacactatacaacacat 740

                                                                       
Query: 541 gcacactgtatattcatcaaagtgtttgtataaacttttgtatttctttttacatacact 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcacactgtatattcatcaaagtgtttgtataaacttttgtatttctttttacatacact 800

                                                                       
Query: 601 tctgtacctgtcttctcatcagcctctctattcaatatctgggtttatatgggtagtcac 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tctgtacctgtcttctcatcagcctctctattcaatatctgggtttatatgggtagtcac 860

                        
Query: 661 taatgatctagca 673
           |||||||||||||
Sbjct: 861 taatgatctagca 873


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space:   704769
Effective search space used:   704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)