Query= MSMg01no490_o09.b1 MSMg01no490_o09.b1 CHROMAT_FILE:
MSMg01no490_o09.b1 PHD_FILE: MSMg01no490_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:37 2005
(306 letters)
>mm_chr4_3861072_3861777
Length = 706
Score = 584 bits (302), Expect = e-171
Identities = 305/306 (99%)
Strand = Plus / Minus
Query: 1 tgctattatgtacattttcatatgatattctagaaatttacctaagggttaaactattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgctattatgtacattttcatatgatattctagaaatttacctaagggttaaactattgt 447
Query: 61 tttttaaattaaatgtcatgttcccatcacaactgggattttaaaagacgtacaactgaa 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 446 tttttaaattaaatgtcatgttcctatcacaactgggattttaaaagacgtacaactgaa 387
Query: 121 acctatgccatgcctgcctttgaaggttacttcagtaatcattttactcaagctgtataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 acctatgccatgcctgcctttgaaggttacttcagtaatcattttactcaagctgtataa 327
Query: 181 tcaaactagccatccttctaggaatgctttaatattatttctttgtaattttgttctttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tcaaactagccatccttctaggaatgctttaatattatttctttgtaattttgttctttg 267
Query: 241 acaatttaacgtgtaaaaaattaacctgttaactcatgagatgagagtttcagaagaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acaatttaacgtgtaaaaaattaacctgttaactcatgagatgagagtttcagaagaaga 207
Query: 301 gtgtct 306
||||||
Sbjct: 206 gtgtct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 706
Length adjustment: 9
Effective length of query: 297
Effective length of database: 697
Effective search space: 207009
Effective search space used: 207009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_o09.g1 MSMg01no490_o09.g1 CHROMAT_FILE:
MSMg01no490_o09.g1 PHD_FILE: MSMg01no490_o09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:37 2005
(320 letters)
>mm_chr4_3683351_3684070
Length = 720
Score = 582 bits (301), Expect = e-171
Identities = 313/317 (98%)
Strand = Plus / Plus
Query: 2 catgacaagctagtgcggctgtacgctgtggtcactaaggaggagcccatctacatcatc 61
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 202 catgacaagctagtgcggctgtacgctgtggtcaccaaggaggagcccatctacatcatc 261
Query: 62 accgagttcatggctaagggtgagtggcatcaccactctgtacccctaaaggaggcaagt 121
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 262 accgagttcatggctaagggtgagtggcatcacgagtctgtacccctaaaggaggcaagt 321
Query: 122 cccaaagcagagaacagtcagctttaatgggaagcatactcagtactggaaagttaaaaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cccaaagcagagaacagtcagctttaatgggaagcatactcagtactggaaagttaaaaa 381
Query: 182 gtaagagaaagagtgcatttcacagtcatagcctggggacagcatttttcttccatgctt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtaagagaaagagtgcatttcacagtcatagcctggggacagcatttttcttccatgctt 441
Query: 242 aaaatctgagtagtcacaattctaaaacagctgagatttcttcttcagcatgatttaaac 301
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 442 aaaatctgagtagtcacaattctaaaacggctgagatttcttcttcagcatgatttaaac 501
Query: 302 ttctgagtgttgcttta 318
|||||||||||||||||
Sbjct: 502 ttctgagtgttgcttta 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
