GCTATACGACTCACTATTCCGAGAGGATCCGCGGAATTCAAAACTTTCCT
AGTCAGAAGTGAGACCTGAGGTTTTTCCAGCACCTAAGATGCCACTCAGT
GCCTAGGATGCCCCTCTGCACCTATGATGCCTCTCAATGCCAAGGGTACA
TGTTGCTTATTTAGAGCCAAGATTTTAGTAAAGTTTTGCACTATAACTAT
GGCCAGTGCCACCAGAAACATTTTGGGTGCTTCATCATGTTTGATTCTGA
ATTCACTTTTGCTTATCATGTGATTGAAATTTATAAGTTACTTTCCTTGA
TTGTATAACAAAATACCTACCTGACCTAACCAACTTAAAGAAAGACATAT
TTACTTTTGTCCACAGCATTTTAGTATATTCTATCATTGTAAGAATGACA
TGACACAATCCCCCTTTATTATACAGCCCAAGAGGGAGGTTGATGGGATG
ATAGCACCTACACTTAGGGGAAGACCACCAACTTAACTTAATTCAGAAGC
CCACTTTCAGACACGCCCAGAGACTTGTCTCCAATTAATTCTAGATTCTG
TCCAGTTGGCAATCAATATAAATCATTAGAGAAGCCTTTCATTAGTGCCT
TGTTTTTTCAGACTCACAATCAACTATGTTACTGAATACCAGAACATGAT
GCACAGTTTTAGAAACCATATTACAAGACTGGAAAGATGATTCAGCCATT
ATAGGCTATACTCACAAGCAAAGAGTTTAAGAAAATAGTTGTGA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXAACATGTATCCTTGCATGTACTAAAATGACCTATTTCATAAA
AATAAAATGCTTCAGTTGAAATCAATATTTCTACATGCTATCACAATCTC
ACTTTTATACATTGGCTTTGCTGGATGTGTATTATTTAATTACTTAAATA
ATTTCAACATTGCCAAAATTTTTGTGTAGTCAGTTTTCTTATATGTACAT
CAGTTCCTTTATATACAATCACAACATTTCTCCTTCAAATAAAGAAGTTT
TAACCAGGTATGATTGCAAAGCTATTTATTTGAATTCATTTATATAATTT
CCATATTTAATGAAGGTCTTGCCCACATAATCTACTTTTTTCCTTTTATT
CTTTAAATCCCATCTCTTATCACTTAAAATTTTGTGCTGGAAATATAATC
TCCAGTACAACAATACAAAGAGATATAGCCTTTAAGTGGTGTTTGAGACA
TAGGCCCCAAACTCCCTCATGACCAGGCTGATGCTTGTACAAAAGGCTTT
TAGTAATGGATTCACTTTTTCTAGACAATTTCCTCTGTAAGGAGGTGTCA
GGGCATAAAACTCCTGATTCTTGTACCTGATCCAGGACTTACAAGCTTAG
CAAACAGTTGATAACAAATCTTTATTCATTAGCATATTTTATTTTGTTAT
ACTAATGTATGGGGACTCTTATTATTATTTAAATTCCTTGTTCCT

Query= MSMg01no494_k17.g1 MSMg01no494_k17.g1 CHROMAT_FILE:
MSMg01no494_k17.g1 PHD_FILE: MSMg01no494_k17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:33 2005
         (575 letters)



>mm_chr4_36256885_36257857
          Length = 973

 Score = 1036 bits (536), Expect = 0.0
 Identities = 559/568 (98%), Gaps = 4/568 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacatgtatccttgcatgtactaaaatgacctatttcataaaaataaaatgcttcagttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 565 aacatgtatccttgcatgtactaaaatgacctatttcataaaaataaaatgcttcaactg 506

                                                                       
Query: 61  aaatcaatatttctacatgctatcacaatctcacttttatacattggctttgctggatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaatcaatatttctacatgctatcacaatctcacttttatacattggctttgctggatgt 446

                                                                       
Query: 121 gtattatttaattacttaaat-aatttcaacattgccaaaatttttgtgtagtcagtttt 179
           |||||||||||||||||   | | ||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtattatttaattactt---tgagtttcaacattgccaaaatttttgtgtagtcagtttt 389

                                                                       
Query: 180 cttatatgtacatcagttcctttatatacaatcacaacatttctccttcaaataaagaag 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cttatatgtacatcagttcctttatatacaatcacaacatttctccttcaaataaagaag 329

                                                                       
Query: 240 ttttaaccaggtatgattgcaaagctatttatttgaattcatttatataatttccatatt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttttaaccaggtatgattgcaaagctatttatttgaattcatttatataatttccatatt 269

                                                                       
Query: 300 taatgaaggtcttgcccacataatctacttttttccttttattctttaaatcccatctct 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 taatgaaggtcttgcccacataatctacttttttccttttattctttaaatcccatctct 209

                                                                       
Query: 360 tatcacttaaaattttgtgctggaaatataatctccagtacaacaatacaaagagatata 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tatcacttaaaattttgtgctggaaatataatctccagtacaacaatacaaagagatata 149

                                                                       
Query: 420 gcctttaagtggtgtttgagacataggccccaaactccctcatgaccaggctgatgcttg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gcctttaagtggtgtttgagacataggccccaaactccctcatgaccaggctgatgcttg 89

                                                                       
Query: 480 tacaaaaggcttttagtaatggattcactttttctagacaatttcctctgtaaggaggtg 539
           |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  tacaaaaggcttgtaggaatggattcactttttctagacaatttcctctgtaaggaggtg 29

                                       
Query: 540 tcagggcataaaactcctgattcttgta 567
           ||||||||||||||||||||||||||||
Sbjct: 28  tcagggcataaaactcctgattcttgta 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 973
Length adjustment: 10
Effective length of query: 565
Effective length of database: 963
Effective search space:   544095
Effective search space used:   544095
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)