NACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAGACGAGCCGC
GGAATTCTTTGGTTACGACAAAGCCCCATTTTTTAATGGGGTTATTTGAT
TTTCTGGAGCCCACCTTCTTGAGTTCTCTATATATATTGGATATTAGTCC
CCTATCCAATTTGGGATAGGTAAAGATCCTTTCGCAATCTGTTGGTGGCC
TTTTTGTCTTATTGACGGTGTCTTTTGCTTTGCAGAAGCTTTGCAATTTT
ATGAGGTCCCATTTATCGATTCTTGATCTTACAGCACAAGCCATTGCTGT
TCTATTCAGGAATTTTTTTCTTGTGCCCATATCTTTAAGGCTTTTCCCTA
CTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTA
ATCCACTTAGATTTGACCTTAGTAAAAGGAGATAGAAATGGATCAATTCG
CATTCTTCTACATGATAACCACCAGTTGTGCCAGCACCATTTGTTGAAAA
TGCTGTCTTTCTTCTACTGGATGGTTTTAGCTCCCTTGTCAAAGATCTAG
TGACTATAGGTGTGTGGATTCATCTCTGGGTCTTCAATCTCCTTCATTGG
NCTACTTGTCCTGCCACTAACCAGTACCATGCAAGTTTGATCCCAATTGC
CTTGTATTAACATTTTAAGGGCCGGGCATGGGGGATTCCTCCCAAAAGGT
CCTTTTATCCCTGGAAAAAAAATTTT

NCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACAACAGAAGTTCTGTTTTCTC
AGGTATGAGGTTCATCAAAAATCCATGAAAGGCTGAAAGCAAGATAATGA
ACTGAAAGGAATCTGATCATCAAATACTTTTGGTATAAACATTTTTGAAG
ATAACATATTTAAGAGTTTATGAATATTAATATAATTGTTCAATCTCTCT
AATAATATTTTATTTCTAATTCACATGACATTTTTAAAGAGTTTCCATCT
AAGCCCCTAGAAAAAGGAGGGTATATTGTCATTAATTAAGCGAGACAATA
GATTGAAAGCAAATTTGTGGAAGCAGACAGTTTTCTAAACTATGTAGGTT
CCAGATAACATGCTACATATCAATTTTTTAAAAATAGATTATTTTCTCTC
AAAGAGAGTGGGATTTATATCATTCTGTAAGACCATTCCCACATAAGAAA
TATAGGAAAGAATATAAGCCACATGCTTTCTGATAATAACAATGGACACA
AAACATTTGCAACAAAAAAATTCCCACCATTCAACCTTTCCTATATTCAT
TAACAAATCTTGAAGAAAAGAAGTGGCTTTAAAAACACACGGTATGTGTA
TTAGAGTCCACAGTTTAAAAGTAAGTCAGAGACACTCTTCCCATTTGTAA
CTCCCAGAGGAGAGTCTCAAAGATTAATTATGTTTCCTGCATCCGTGCAG
ATAGAGGTACAGTGAATA

Query= MSMg01no495_n14.g1 MSMg01no495_n14.g1 CHROMAT_FILE:
MSMg01no495_n14.g1 PHD_FILE: MSMg01no495_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:00 2005
         (602 letters)



>mm_chr4_26802578_26803580
          Length = 1003

 Score = 1069 bits (553), Expect = 0.0
 Identities = 587/599 (97%), Gaps = 3/599 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaacagaagttctgttttctcaggtatgaggttcatcaaaaatccatgaaaggctgaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaacagaagttctgttttctcaggtatgaggttcatcaaaaatccatgaaaggctgaaa 260

                                                                       
Query: 61  gcaagataatgaactgaaaggaatctgatcatcaaatacttttggtataaacatttttga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaagataatgaactgaaaggaatctgatcatcaaatacttttggtataaacatttttga 320

                                                                       
Query: 121 agataacatatttaagagtttatgaatattaatataattgttcaatctctctaataatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agataacatatttaagagtttatgaatattaatataattgttcaatctctctaataatat 380

                                                                       
Query: 181 tttatttctaattcacatgacatttttaaagagtttccatctaagcccctagaaaaagga 240
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttatttctaagtcacatgacatttttaaagagtttccatctaagcccctagaaaaagga 440

                                                                       
Query: 241 gggtatattgtcattaattaagcgagacaatagattgaaagcaaatttgtggaagcagac 300
           |||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 gggtatcttgtcattcattaagcgagacaatagcttgaaagcaaatttgtggaagcagac 500

                                                                       
Query: 301 agttttctaaactatgtaggttccagataacatgctacatatcaattttttaaaaataga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agttttctaaactatgtaggttccagataacatgctacatatcaattttttaaaaataga 560

                                                                       
Query: 361 ttattttctctcaaagagagtgggatttatatcattctgtaagaccattcccacataaga 420
           ||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 561 ttattttctctcaaagaaagtggggtttatatcattctgtaag-ccattcccacataaga 619

                                                                       
Query: 421 aatataggaaagaatataagccacatgctttctgataataacaatggacacaaaacattt 480
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aatataggaaagaatataatccacatgctttctgataataacaatggacacaaaacattt 679

                                                                       
Query: 481 gcaacaaaaaaatt--cccaccattcaacctttcctatattcattaacaaatcttgaaga 538
           ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 680 gcaacaaaaaaattttcccaccattcaacctttcttatattcattaacaaatcttgaaga 739

                                                                      
Query: 539 aaagaagtggctttaaaaacacacggtatgtgtattagagtccacagtttaaaagtaag 597
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 740 aaagaagtggctttaaaaacacatggtatgtgtattagagtccacagtttaaaagtaag 798


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1003
Length adjustment: 10
Effective length of query: 592
Effective length of database: 993
Effective search space:   587856
Effective search space used:   587856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)