CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGATAATTCATCTCTCTTGTCTCAAAACCCAGCTCAAATTCTGCTT
TCTCTTGGACTTCATTGAATTATTCAGATACAAAAGTTTGTATCTGCAGT
ATCCTATACTCTAGGGATGGAGCAGTTGATAATCAGGCCGCGTCCCCCTC
ATGGTTTTTACCAACTACAAGAAAGATGTATATTAATCAGATAGTCACAT
ACACATATGATTATAGACCCGTCTCACTGTTGTGATGGAGTGGTTCCTGG
GCTACCTGGACAAATGCAGAGTTCTTTTCCGAGTTAAACATGATAGAATA
GATGTTCTCCCTGCTGTGAACAAATGTATGATCTCAGAGAAAATGCAAAC
CAAGACACAGAATACAAAAGTTCCTCTGTTCAAAATCCTCCTGAGTCAGA
AATTAGATACATAATAAAACAATTTAACTACCAACTGAGGTGCCAGTCAT
TCAGCACAACTGAGCTTAAAGACAAAACAAAACAAAAACTCTGATAACTT
TTGAAACTCTTAGTGTGAGTATTCAGCGAACACAGCCAAGGGCTAGTGAG
CTAAATGAGTCACATTTTGTTTAAGGCAACCAGAAAGACTGCATTTTAAA
ACGGAGACCGTTTCAAAGAGGCTTTGGTGAGTACATTATTTTCTGCAATG
CTGTGACAGGCTGTGAGAGAAGACGAATCAGATAAAAATCCTCACCTGTG
TGTAACTAATACCTGCAGTCT

CAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATTAATCCACTTAGATTTGACCTTAGTAC
AAGGAGATAGGAATGGATCAATTAGCATTCTTCTACGTGATAACTCCCAG
TTGTGCCAGCACCATTTGTTGAAAATGCTGTCATTTTTCCACTGGATGGT
TTTTGCTCCCTTGTCAAAGATCAAGGGACCATAGGTGTGTGGGTTCATTT
CTGGGACTTCAATTGTATTCCATTGGTCTACTTTTATGTTGCTATACCGT
TACCATGCCGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACACAAT
TGCTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAAAGGTTC
TTTTATCCTTGAAAAAAGTTTTTGCTATCCTCAGTTTTTTGTTATTCCAG
ATGAATTTGCAGATTGCTCTTTCTAATTCATTGAAAAATTGAGTTGGAAT
TTTGATGGGGATTGCATTGAATCTGAAGATTGCTTTTGGCAAGATAGACA
TTTTTACTATATTGATCCTGCCATTCCAAGACCATGGGAGATCTTTCCAT
CTTCTGAGATCTTCTTTAATTTCTTTTTTAAGAGACTTGAAGTTCTTATC
ATACAGATCTTTCACTTCCTTAGTTAGGGTCTCACCAATGTATTTTATAT
TATTTGTGACTATTGAGAAGGGTGTTATTTCCCTAATTCCTTTCTCAGCC
TGTTTATCTTTTGTGTACAGAAAGGCC

Query= MSMg01no496_g17.b1 MSMg01no496_g17.b1 CHROMAT_FILE:
MSMg01no496_g17.b1 PHD_FILE: MSMg01no496_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:44 2005
         (673 letters)



>mm_chr4_35717994_35719066
          Length = 1073

 Score = 1224 bits (633), Expect = 0.0
 Identities = 660/669 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgataattcatctctcttgtctcaaaacccagctcaaattctgctttctcttgg 64
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 gaattctgataagtcatctctcttgtctcaaaacccagctcaaattctgctttctcttgg 814

                                                                       
Query: 65  acttcattgaattattcagatacaaaagtttgtatctgcagtatcctatactctagggat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 acttcattgaattattcagatacaaaagtttgtatctgcagtatcctatactctagggat 754

                                                                       
Query: 125 ggagcagttgataatcaggccgcgtccccctcatggtttttaccaactacaagaaagatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ggagcagttgataatcaggccgcgtccccctcatggtttttaccaactacaagaaagatg 694

                                                                       
Query: 185 tatattaatcagatagtcacatacacatatgattatagacccgtctcactgttgtgatgg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tatattaatcagatagtcacatacacatatgattatagacccgtctcactgttgtgatgg 634

                                                                       
Query: 245 agtggttcctgggctacctggacaaatgcagagttcttttccgagttaaacatgatagaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 agtggttcctgggctacctggacaaatgcagagttcttttccgagttaaacatgatagaa 574

                                                                       
Query: 305 tagatgttctccctgctgtgaacaaatgtatgatctcagagaaaatgcaaaccaagacac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tagatgttctccctgctgtgaacaaatgtatgatctcagagaaaatgcaaaccaagacac 514

                                                                       
Query: 365 agaatacaaaagttcctctgttcaaaatcctcctgagtcagaaattagatacataataaa 424
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 513 agaatacaaaagttcctctgttcaaaatccttctgagtcagaaattagatacatagtaaa 454

                                                                       
Query: 425 acaatttaactaccaactgaggtgccagtcattcagcacaactgagcttaaagacaaaac 484
           |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 453 acaatttaaccaccaactgaggtgccagtcattcagcataactgagcttaaagacaaaac 394

                                                                       
Query: 485 aaaacaaaaactctgataacttttgaaactcttagtgtgagtattcagcgaacacagcca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aaaacaaaaactctgataacttttgaaactcttagtgtgagtattcagcgaacacagcca 334

                                                                       
Query: 545 agggctagtgagctaaatgagtcacattttgtttaaggcaaccagaaagactgcatttta 604
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 agggctagcgagctaaatgagtcacattttgtttaaggcaaccagaaagactgcatttta 274

                                                                       
Query: 605 aaacggagaccgtttcaaagaggctttggtgagtacattattttctgcaatgctgtgaca 664
           || | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aatcagagaccgtttcaaggaggctttggtgagtacattattttctgcaatgctgtgaca 214

                    
Query: 665 ggctgtgag 673
           |||||||||
Sbjct: 213 ggctgtgag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space:   704769
Effective search space used:   704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)