TCTCCTTCTTTTCTTTTTTCNTCTTCCCTTTTCCTCCTAATXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAATTCTCACCTGAT
GAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAAT
CATAAGGGAAATGCAAATCAAAACAACCCTAAGATTCCACCTCACACCAG
TCAGAATGTCTAAGATCAAAATTCAGGTGACAGCAGATGCTGTCGATGAT
GTGGAGAAAGAAGAACACTCCCTCCATTGTTGGGGGGAATGCAGGCCTGG
TACAACCACTCCGGGAAATCTTCCGGGGGGGTTCTTCCTAAAAATTTGAA
CATAGGTATTTACGGGAGGTTCCCCCCCTTACCCCTTCTCGGGGGAATAA
TTTCCCTAAAAAACGCCCCCCCTTTGGTTTAAAAAAGGAACACTTGGGCC
CCCCCATTGTTTTCTCTTAAACACCTTCTTTTTTTTTTATTATACCCCCC
CAAAATCCTTTGTATAAATTCCCTTAAGCTGGCCTCTTTTCTTTATTGGT
TTGGGTGTTACAATATAAATGGGTGGCTTTCTCCCCCCTCCATTTGGGTT
TTCTTTTCTCCCCTTCCGTTTAATTATGAATTTTGTCCTTTTCGTGATTT
TCTTTTCCCTCCTCTCCATTTTGTTGTCGTCTTTTTTTTTTGTTTCTCTT
CATCCATCCTCACTTGTGTG

TTCTTTTATCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGTCCTTTAGCAGA
TACAGAACTAAAGACGATTTGGGTGGCTCTGGGACAAAGACTCTAAATAT
CAAATGAGGTGGGTAGTGGTTTTCTGTGTTAGATGCATATAGCATTTCTG
TAAGAATATGAATTTATTATATTCTATGGTATAACAACTATCGTTGTAAC
AAGAAAGGCTGAAGCTGAGGAGTCACAATAGAGACTGCTTGCACAAAGAG
AAAAACCTCAAATGGCTGACTATCCAACAATTTTTGAAATGTCCCTTTCT
AGCTGGTAGCAGCTGGAGGACCAGAGCACTGCAGGAACACAGAGGATACC
AGCACAGCAGTTTTGAATCTGGGATGCACATGAAACTCACCTGAGAAAAC
AAACAGCTGCAAGGCCAAATGCCTGGCTTCGGATATTCTACATTCATGCC
TGGATCAGCCATCCCCAGCTTTTAAACATGAGTAAACTTTACTTTTAGAG
CAATTTTCGAGTCATGGCAAATCTATGCAGGACTTGCAGAGTTCTTGTGA
GCCCTGGGCTCCACACATGCATAACCTCCCTTGCCACCAACATCCAAATG
AGTGAGTGGTTCATTTGTTACAACTGAATCTGCCCCATACACAGCTTTCC
CTCCACAGTGATGGCTGTGGACTAAATCATGGCTTCCTAAN

Query= MSMg01no498_b04.g1 MSMg01no498_b04.g1 CHROMAT_FILE:
MSMg01no498_b04.g1 PHD_FILE: MSMg01no498_b04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:58 2005
         (612 letters)



>mm_chr4_81140453_81141464
          Length = 1012

 Score = 1122 bits (580), Expect = 0.0
 Identities = 604/612 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tagtcctttagcagatacagaactaaagacgatttgggtggctctgggacaaagactcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagtcctttagcagatacagaactaaagacgatttgggtggctctgggacaaagactcta 260

                                                                       
Query: 61  aatatcaaatgaggtgggtagtggttttctgtgttagatgcatatagcatttctgtaaga 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 aatatcaaatgaggtgggtagtggttttctgtgttagatgtatatagcatttctgtaaga 320

                                                                       
Query: 121 atatgaatttattatattctatggtataacaactatcgttgtaacaagaaaggctgaagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatgaatttattatattctatggtataacaactatcgttgtaacaagaaaggctgaagc 380

                                                                       
Query: 181 tgaggagtcacaatagagactgcttgcacaaagagaaaaacctcaaatggctgactatcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaggagtcacaatagagactgcttgcacaaagagaaaaacctcaaatggctgactatcc 440

                                                                       
Query: 241 aacaatttttgaaatgtccctttctagctggtagcagctggaggaccagagcactgcagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacaatttttgaaatgtccctttctagctggtagcagctggaggaccagagcactgcagg 500

                                                                       
Query: 301 aacacagaggataccagcacagcagttttgaatctgggatgcacatgaaactcacctgag 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 aacacagaggataccagcacagcagttttgaatctgggatgcacatgaaactcacctggg 560

                                                                       
Query: 361 aaaacaaacagctgcaaggccaaatgcctggcttcggatattctacattcatgcctggat 420
           |||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 561 aaaacaaacagctgcaagaccaaatgcctggctccagatattctacattcatgcctggat 620

                                                                       
Query: 421 cagccatccccagcttttaaacatgagtaaactttacttttagagcaattttcgagtcat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagccatccccagcttttaaacatgagtaaactttacttttagagcaattttcgagtcat 680

                                                                       
Query: 481 ggcaaatctatgcaggacttgcagagttcttgtgagccctgggctccacacatgcataac 540
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 681 ggcaaatctatgcaggacttgcagagttctcgtgagccctgggctccacacatgcataac 740

                                                                       
Query: 541 ctcccttgccaccaacatccaaatgagtgagtggttcatttgttacaactgaatctgccc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctcccttgccaccaacatccaaatgagtgagtggttcatttgttacaactgaatctgccc 800

                       
Query: 601 catacacagctt 612
           |  |||||||||
Sbjct: 801 cccacacagctt 812


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space:   603204
Effective search space used:   603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)