NNNNCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
GCGCGGAATTCATCGGGATTTCGCTCACTCCGAGCAATGGGATTTTCATT
TAGTGACCTAAGGCTTCTGGAATCAGCTTTCTACTTACACAGGTTATATC
TGTTAGGAGTACAAAGGTCCTTATGTTCACAGATAGCTCAAGGGAAGCCA
AGAATGTTAAACATGTAGGATTGTCTTTTTATAAGAAAAGCTATTTAACC
TGTTTTCCTGTTGGTCTGTACTATCTGAAGGGCCAGGCCATACCAAACTC
CCTTAAGCAGGACCAGAGATGACAACAGTCTATGTGACATTTTCACCATT
TGTATAGCCAGGGGCTCCCCCAAGACCCCCAACAAGGACCAGAGGTGGCT
AAAAGCCCAAATGACATCTATGCTGTCTGTCTTACTGAGACCACACCAGA
TCGTTCCCTAGGACCTTAAGATAATACATGTAGCCTCATCTCTAGAACCC
ATCTTCTTGGAAGAAGTGACATATACTTTAGTTGAGTTTTGTTGGAATTA
TGACTCCTTGTGCCTAGAAGCCCTGGAGAACCACTGCTTTCTGACTTACT
CTCTATGGGGTGCTCAGTCAGCTTTTTGATGCAACTCAGGACCACATAGG
TGGTAAGGGTGCTTGGCACCACCCTCTGTGGGGTGGGCCTACCCACATCA
ATCAAGAAAANTCCGGGGTGCTTGGAGAGATGGCTCATTGGTTAAAAGCA
CCAACTGCT

AAAAAGAGAGGGAGGGGGAGGGGAAAGGAGGGGGAAAAAAAAAAAAGAAG
GAAAAAAGGGAAGGAAGAGAGAGAGGGGGGGGGGAAGGGGGGGGGAGAAA
AAAGAGAGAAAAAGAAAAAAAGAAAAAAAAGGAGGGGGGGAGGAAAAAAA
AAAGAAAAAGAAAAAGAAAGAAAAAAAAGAAAAAAGAGAAAAGAGAGGGA
AAAGAGNGAAAGAAAAAAAGAAAAAGAAAGGAAAGAAAAANNAANNNNAA
GGAAAGGGGAGGAGAAGAAGAAAGAAAGAAAAGAAAAAAAAAGAGAGGGA
GAGAGGAGGGAGGGAGAGAGGAGAAANNNANNNNNNNNNNNNAAGGAGAG
GGGGGGGNAAAAGAGAAAAGAGAGAAGAAGAGAAAGGGAGGGGAGGAGAG
AAGGGGGAAGAGGGGGGGAAAAAAAAAAAAAAGGGGAGGAGGAAGAGAAN
NNNGGAGAAGGAAAAANANNAGGGAAAAGGGAAAAAAGGGGGGNAAGGGG
NNAGAGAGGGGGGGAGGGGAANNNGGGGGNGGGGGGGGGGGAAGGGGGGG
GGGGGGGGGGGGGGAAAAANNNNAAAAAAAAANGAGGGGGAAAAANNNGG
GGGGGGGGAAAGGGGGGGGGGAGAAGGGGGGGGNNNNNNNNGGGGGGAAA
NGGGAGGGGGGGGGGGNNNNNGNNNNGNNAAANNGAAAAAAAAAGGGGGG
GGNGNGGGGGGGGGGGGGGAGGAAAAAANGGGGAAGNAAGGGGGGG

Query= MSMg01no498_i03.b1 MSMg01no498_i03.b1 CHROMAT_FILE:
MSMg01no498_i03.b1 PHD_FILE: MSMg01no498_i03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:35 2005
         (601 letters)



>mm_chr4_126742472_126743472
          Length = 1001

 Score = 1147 bits (593), Expect = 0.0
 Identities = 599/601 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcactccgagcaatgggattttcatttagtgacctaaggcttctggaatcagctttctac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcactccgagcaatgggattttcatttagtgacctaaggcttctggaatcagctttctac 260

                                                                       
Query: 61  ttacacaggttatatctgttaggagtacaaaggtccttatgttcacagatagctcaaggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacacaggttatatctgttaggagtacaaaggtccttatgttcacagatagctcaaggg 320

                                                                       
Query: 121 aagccaagaatgttaaacatgtaggattgtctttttataagaaaagctatttaacctgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagccaagaatgttaaacatgtaggattgtctttttataagaaaagctatttaacctgtt 380

                                                                       
Query: 181 ttcctgttggtctgtactatctgaagggccaggccataccaaactcccttaagcaggacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcctgttggtctgtactatctgaagggccaggccataccaaactcccttaagcaggacc 440

                                                                       
Query: 241 agagatgacaacagtctatgtgacattttcaccatttgtatagccaggggctcccccaag 300
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agagatgacaacagtctaggtgacattttcaccatttgtatagccaggggctcccccaag 500

                                                                       
Query: 301 acccccaacaaggaccagaggtggctaaaagcccaaatgacatctatgctgtctgtctta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acccccaacaaggaccagaggtggctaaaagcccaaatgacatctatgctgtctgtctta 560

                                                                       
Query: 361 ctgagaccacaccagatcgttccctaggaccttaagataatacatgtagcctcatctcta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 ctgagaccacaccagatcgttccctaggaccttaagataatacatgtagcctcatctata 620

                                                                       
Query: 421 gaacccatcttcttggaagaagtgacatatactttagttgagttttgttggaattatgac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaacccatcttcttggaagaagtgacatatactttagttgagttttgttggaattatgac 680

                                                                       
Query: 481 tccttgtgcctagaagccctggagaaccactgctttctgacttactctctatggggtgct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tccttgtgcctagaagccctggagaaccactgctttctgacttactctctatggggtgct 740

                                                                       
Query: 541 cagtcagctttttgatgcaactcaggaccacataggtggtaagggtgcttggcaccaccc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagtcagctttttgatgcaactcaggaccacataggtggtaagggtgcttggcaccaccc 800

            
Query: 601 t 601
           |
Sbjct: 801 t 801


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)