Query= MSMg01no499_m21.b1 MSMg01no499_m21.b1 CHROMAT_FILE:
MSMg01no499_m21.b1 PHD_FILE: MSMg01no499_m21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:17 2005
(667 letters)
>mm_chr4_126470207_126471270
Length = 1064
Score = 1122 bits (580), Expect = 0.0
Identities = 621/636 (97%), Gaps = 3/636 (0%)
Strand = Plus / Minus
Query: 4 gaattcccattccagtacatgtaatgcctcattctgacctctgtacagcaccaagcacag 63
||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 633 gaattcccattccaggagatgtaatgcctcattctgacctctgtacggcaccaagcacag 574
Query: 64 atacaggaacgtcatgcagcagtctatacagagaaccagtaccattttcaagggtccact 123
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 573 atacaggaacgtcatgcagcagtctatacagagaaccagtaccattttcaggggtccact 514
Query: 124 gagggctcagaacatcctgttttgatgagggaaagctgccgtcatccttaagcacttagc 183
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 513 gagggctcagaacatcctgttttgatgagggaaagctggcgtcatccttaagcacttagc 454
Query: 184 actgctcagtaggagagtatgtgtgtaacatgtccagggctaggttctgctaatgccata 243
||||||||||||||||| | |||||||||| |||||||||||||||||||| |||||
Sbjct: 453 actgctcagtaggagagca---gtgtaacatgcccagggctaggttctgctaacgccatc 397
Query: 244 atcacacaccactgggaaggcttagcttcttgtgtcattgtcccctgaggacacaggcca 303
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 396 atcacacaccactgggaaggcttagcttcttgtgtcagtgtcccctgaggacacaggcca 337
Query: 304 tgtcttacatgcttccactcttctagtgcttagagaagtatctcacattgatggtgggtt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtcttacatgcttccactcttctagtgcttagagaagtatctcacattgatggtgggtt 277
Query: 364 tccttaaatggtcgtgggcatactgagtcagagtgggatcctcttaatgcttcactcaga 423
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tccttaagtggtcgtgggcatactgagtcagagtgggatcctcttaatgcttcactcaga 217
Query: 424 gttcttcctaaatagtcaggctggctttcgatgccagagctgctgctcagtagctgcatg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gttcttcctaaatagtcaggctggctttcgatgccagagctgctgctcagtagctgcatg 157
Query: 484 atttcaggcaagctgcttcacctcttttgggcctcagtttcctcactagtaaaacaaaac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 atttcaggcaagctgcttcacctcttttgggcctcagtttcctcactagtaaaacaaaac 97
Query: 544 taataatacctacttggaaatattgccatgaaaattaaacaaaatgacatagtacaggga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 taataatacctacttggaaatattgccatgaaaattaaacaaaatgacatagtacaggga 37
Query: 604 ttaacacacacagtgcctggcaagtagtaacctccc 639
||| ||||||||||||||||||||||||||||||||
Sbjct: 36 ttagcacacacagtgcctggcaagtagtaacctccc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1064
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1054
Effective search space: 692478
Effective search space used: 692478
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_m21.g1 MSMg01no499_m21.g1 CHROMAT_FILE:
MSMg01no499_m21.g1 PHD_FILE: MSMg01no499_m21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:17 2005
(567 letters)
>mm_chr4_33288285_33289252
Length = 968
Score = 224 bits (116), Expect = 1e-62
Identities = 131/136 (96%), Gaps = 1/136 (0%)
Strand = Plus / Minus
Query: 433 tttttt-tttatgtcattagtttatttacaattttttctagtataagagttcaagagttt 491
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 768 ttttttctttatgtcattagttcatttacaattttttctagtataagagttcaagagttt 709
Query: 492 aatccaattttcagatcatctcttaaactttcttcattctgttaaagggatgaattaaat 551
||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 708 aattcaatttttagatcatctcttaaagtttcttcattctgttaaagggatgaattaaat 649
Query: 552 atccttattttttaag 567
||||||||||||||||
Sbjct: 648 atccttattttttaag 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 968
Length adjustment: 10
Effective length of query: 557
Effective length of database: 958
Effective search space: 533606
Effective search space used: 533606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
