XXXXXXXXXXXXXXXXXXXXXXNAGTGCTGAGGTGCGGCGGATTCTCTGA
GCNGTACTAATGTGTAAACTAAAATATCTGGGGTTTTGGTTGGTTGGTTG
GTTGGTTGGTTTTGTCTGGTGGAGATTTATTTATTTATTGTTAACCATAC
ATTTTGTTGTTGAGAAGGGTCTTACTCTGTATTCCAACCTGACTTGCACC
TCACTATGTAGCCCAGAATGGCATTACACTCATAGCAATACTCTTTTTTC
TTCCACCTGAGTGCTGAACTTACACGTTTGAGACTCCATACGTGACCCTG
CGCCCGCAGTTTTCCTGCTTGGCCGGAAGGCCGGCNGATTAGGGGAGACT
TTTGTTATTCCCCCATTCCCATGTGGAGGTTTCCCGCCTCTGGGTCCGAC
TGATCCCCCCCCCTTTCCCTTTTTTTTTCTCTCATCCTCATCACCCCCCC
ACCCTTTACTCTCCCTCTTTCCCCCTCTCTCTATTTCTTTCCCTCCTTCC
CCCGTTTTTACTTTATATTTCATTAGCCCCTTCCATCTTTCTCATTCGTT
TATCTCACCCCCCCTCTCTTCCCCTTCATCCCCCTATCTCTCATATCTAC
ACCCACCCTCCTTCTCCCACGCCCTCCCACTCTTTTCCCCCCTACACTTA
TCTCACACCCCCCCTCTCTCTAACAACCCCCCCTCCTTCTTTTTCTCACT
TCCCCGCCTATACTTCATATCCCCCACCCACTCTTCCCATCCATCCCACT
ATTATACAATCTCATTTCCCCCAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXCAAGAACAGAAAATTGTATTGCTTACCTCTGCCGTGACTGT
TTGGATTACGCTCATACTTACACACAGCCACAGAAGGCCATCCTAATTCC
CTGGCCGACATGCCTGTGGTCCTCTGCGTCTTTGTCTGAGGTCCCCCCAA
CCCCCATTCCAGACACTGTGGACATGTTAGTGACTTCAGAAAGACCGGGA
GCAACTGTTAACTGTTTACGGGGTAAACATCCCACCTTCCCAAGAGTTAG
TGGGACAGTTTTGGGTGTGTTCTGCTCTGCCCTTCAGAGTGCTCACTGCA
GGACCCACCCGTGGACTTTCCAGGGCAGTAACTTGATCACTTTCCTTTCG
ATGCTTGCTTGAGCTTTAGTGGAGTTCTTTCCCAATGAAAGCAGCTACAA
GCAGGAGCTGCTGGGAAAGGCAGGGTGGGCAGACAATGCCGGGAAATGGA
TGTGTTGGAACAAATATGTATACATAATTAAATAACCAAAACACTTAGGC
ACTGTGCTGGGTACACCCGTTCTGTATCTCCATCCTTAGCAAGCTGTTGA
TATCCCCATTTCAGATGAGAAATAGAAGAAAATGAAAATCGAACCGGGGA
AGACAGTTCAGTCCTTAAAGTGCTTGCCTAAGCAGCATGAAGACCCTGGG
TCATCCCTATGAACATGCAGAAAGCCAG

Query= MSMg01no501_n21.g1 MSMg01no501_n21.g1 CHROMAT_FILE:
MSMg01no501_n21.g1 PHD_FILE: MSMg01no501_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:46 2005
         (586 letters)



>mm_chr4_53412630_53413619
          Length = 990

 Score = 1091 bits (564), Expect = 0.0
 Identities = 582/590 (98%), Gaps = 4/590 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caagaacagaaaattgtattgcttacctctgccgtgactgtttggattacgctcatactt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 caagaacagaaaattgtattgcttacctctgccgtgactgtttggattacgctcatactt 731

                                                                       
Query: 61  acacacagccacagaaggccatcctaattccctggccgacatgcctgtggtcctctgcgt 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 730 acacacagccacagaaggccatcctaattccctggctgacatgcctgtggtcctctgcgt 671

                                                                       
Query: 121 ctttgtctgaggtccccccaacccccattccagacactgtggacatgttagtgacttcag 180
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 670 ctttgtctgaggtccccccaacccccattccagacactgtggacgtgttagtgacttcag 611

                                                                       
Query: 181 aaagaccgggagcaactgttaactgtttacggggtaaacatcccaccttcccaagagtta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aaagaccgggagcaactgttaactgtttacggggtaaacatcccaccttcccaagagtta 551

                                                                       
Query: 241 gtgggacagttttgggtgtgttctgctctgcccttcagagtgctcactgcaggacccacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gtgggacagttttgggtgtgttctgctctgcccttcagagtgctcactgcaggacccacc 491

                                                                       
Query: 301 cgtggactttccagggcagtaacttgatcactttcctttcgatgcttgcttgagctttag 360
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tgtggactttccagggcagtaacttgatcactttcctttcgatgcttgcttgagctttag 431

                                                                       
Query: 361 tggagttctttcccaatgaaagcagctacaagcaggagctgctgggaaaggcagggtggg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tggagttctttcccaatgaaagcagctacaagcaggagctgctgggaaaggcagggtggg 371

                                                                       
Query: 421 cagacaatgccgggaaatggatgtgttggaacaaatatgtatacataattaaataaccaa 480
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cagaccatgccgggaaatggatgtgttggaacaaatatgtatacataattaaataaccaa 311

                                                                       
Query: 481 aacacttaggcactgtgctgggta----cacccgttctgtatctccatccttagcaagct 536
           ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||
Sbjct: 310 aacacttaggcactgtgctgggtacatccacccgttctgtatctccatccttagcaagct 251

                                                             
Query: 537 gttgatatccccatttcagatgagaaatagaagaaaatgaaaatcgaacc 586
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gttgatatccccatttcagatgagaaatagaagaaaatgaaaatcgaacc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 990
Length adjustment: 10
Effective length of query: 576
Effective length of database: 980
Effective search space:   564480
Effective search space used:   564480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)