GACTCACTATTCCGAGAGGATCCGCGGAATTCCTAATGTCATTGCCTATA
CTGTTGTGTATCTGCTAGGATGCAACTCAGTCACCTAAGCTATACTTGTC
CTCAAATGTTCTAATACCAACAGCACATGGTTAACAATGTTATGTAGTCA
AGTGATCCGACTTGCACAAGATCCTGGCAGCACAAGTTGAAAACCACTAA
ATTGGTCTGATATATTTCAGTTCAGGAGGTAAACAACTTTGAAGCTCATA
AAGACCTCCTCCCAAATTTTCCACACCAATATTTTTATCCAGACTGACTT
AAGTTCCCACCACACTAACAGTCTTAAGATAGGCATCTATGTTCAAGGGA
GTGTTCTGTTGCTGTTTTAAGGTATTAATCTAAACCAGTATGAAAGTGTT
GCTGCACATCACAATACCAGTAATGTACTATTTCACACTAAGTCACTGAA
GGTTGGTACAGTCAACACCCATTTACTCTGTCCTGTCATAGCTTCTATTA
TCTATACTTCCAATTACATCACTTAGAAAAGTTCTACCAGGTAACATCAT
TTAGGGACTGGGATAATAGTTGAGAATTCGACTACATTTTATTCAGTTGC
TAAGGTAGTTTTGTGCTGCTCACAGTACTTGAAGCAGGATCTCAATATGC
ATTCCAAGCTAGCCTCAAACTCAGGTGACC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAGTCAGGAGACAGAAACACTGGAGGGAGGGAAAG
GGCTCAAGCTGGAAGGAAGACAAAACTGAAAAACCCAATAGCCCAACTAG
AAAGCTTGAAGGAAAGACTTATAACTAAAATGATTCAAGCAGAAGGTAAA
ATAGCAGGACTCAAATATAAAGTAGAGGGTCTAGACCAAATAAGTAAGGA
ATATGAAAAACTAAACACACACACACACACGGGGAGAGGGGAGGAGCATA
CAGGAAATGTGGGATACCATGGAAAAAAACAAATGCTGCAAAAGATACAT
AATAGATAAGGGACAAAAAATGGCAAATCAATGACATAAACCAGGTATTC
AACAAGATCACAGAACAAAACTTCCACAAACTATGGAAAGACATACCCAT
ATAGATAAAAGAAGCACACAGAACACCAGACAGGTACAGAAAAGAAATTC
TCCACAGCATGTCATGGTTAGTAAATATACAGAACCCCATCAGAATAACA
GCTGATTGCTCAATGTAATATTTGGAGCCTAGAGCAATGCATTCAAAACC
TTAAGAGACTATATCAGCCAGCACTGACGAATACACCTAGTAAAAAACAT
CTGCCATAACTGAGGGAAAGAGAAAAACTTTCCATGACATAATCAGCCTN
AACATTTTCTATACAAAAAAAAAAAAA

Query= MSMg01no502_e17.b1 MSMg01no502_e17.b1 CHROMAT_FILE:
MSMg01no502_e17.b1 PHD_FILE: MSMg01no502_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:17 2005
         (655 letters)



>mm_chr4_34505496_34506550
          Length = 1055

 Score = 1064 bits (550), Expect = 0.0
 Identities = 574/588 (97%), Gaps = 10/588 (1%)
 Strand = Plus / Minus

                                                                        
Query: 78   tacttgtcctcaaatgttctaataccaacagcacatggttaacaatgttatgtagtcaag 137
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1055 tacttgtcctcaaatgttctaataccaacagcacatagttaacaatgttatgtagtcaag 996

                                                                        
Query: 138  tgatccgacttgcacaagatcctggcagcacaagttgaaaaccactaaattggtctgata 197
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995  tgatctgacttgcacaagatcctggcagcacaagttgaaaaccactaaattggtctgata 936

                                                                        
Query: 198  tatttcagttcaggaggtaaacaactttgaagctcataaagacctcctcccaaattttcc 257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935  tatttcagttcaggaggtaaacaactttgaagctcataaagacctcctcccaaattttcc 876

                                                                        
Query: 258  acaccaatat----------ttttatccagactgacttaagttcccaccacactaacagt 307
            ||||||||||          ||||||||||||||||||||||||||||||||||||||||
Sbjct: 875  acaccaatattctacactacttttatccagactgacttaagttcccaccacactaacagt 816

                                                                        
Query: 308  cttaagataggcatctatgttcaagggagtgttctgttgctgttttaaggtattaatcta 367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815  cttaagataggcatctatgttcaagggagtgttctgttgctgttttaaggtattaatcta 756

                                                                        
Query: 368  aaccagtatgaaagtgttgctgcacatcacaataccagtaatgtactatttcacactaag 427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755  aaccagtatgaaagtgttgctgcacatcacaataccagtaatgtactatttcacactaag 696

                                                                        
Query: 428  tcactgaaggttggtacagtcaacacccatttactctgtcctgtcatagcttctattatc 487
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695  tcactgaaggttggtacagtcaacacccatttactctgtcctgtcatagcttctattatc 636

                                                                        
Query: 488  tatacttccaattacatcacttagaaaagttctaccaggtaacatcatttagggactggg 547
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 635  tatacttccaattacatcacttagaaaagttctaccagataacatcatttagggactggg 576

                                                                        
Query: 548  ataatagttgagaattcgactacattttattcagttgctaaggtagttttgtgctgctca 607
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 575  ataatagttgagaattcgactacattttattcagtggctaaggtagttttgtgctgctca 516

                                                            
Query: 608  cagtacttgaagcaggatctcaatatgcattccaagctagcctcaaac 655
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515  cagtacttgaagcaggatctcaatatgcattccaagctagcctcaaac 468


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space:   674025
Effective search space used:   674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)