NNNNACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCATAATCCACTAAGATAGTTTAAATTCATCATGCCACCCA
CAGATCTGCCCTCAGTCATATCTGGGACAAAACACACAGAGCCCCATCTA
CCATCCTGAAGTGCAGGGATAGAATAGGAAGATAGACCACCATGTCACCC
CTAGGCCTGCCCTCTAGTACACTACCCAGGAGGCTATGGACACCTGCTTG
CCACACCACACCACACAGCATAAGCAAAGGATGTTACACATGGGGCCACT
ATCTTCATGCTCATCCTGCAGTGGGAGCCACCACATTGTGACAGTTAAAT
GAGAGAGAAAGAATTGGAACACCTTCAGTATCAGTATCATGAAGAGAGGT
AAAACTGGAGATGAGGGTAAAGAGGAGTAGCCTGCTATAAGCAGGCAACC
CTGCCACCTCAGGATATGGTGAGATTCCAGCCCAAGTTGTCACTGAGGGC
CATGTCTAGGTCAGGTATCAGTCTCATTGTCTATGGCTCATATTACCACT
AAAGAACATGGGGACATGTCTGGTCAGGGTAGCTTCTGGGGAGGACATAG
GTGTCCAAGGGCTGTGCAGAATTGCCCTTGCCACTCACTGACTTTGGTGC
TCTGGATAGCTGAACCCCTGTCTCAATAACAGCAGTACTCAGGAGAGCAA
ATCTTGCCCCTCACCCAGACAGTACAATGGAGCTAGCCCTGATGGCATTA
GTGTGAATGG

NNNNAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACTGACATTTCTCATAT
ATCAATGTCTACTATAAGCAGGACAATATCAGATCCAGTTGAAATACAGG
TACTAATTGAAAACTTGACTTTCATAAAAGCAATTACAGACTGCAAAATT
TCTGAGACCTTAAGAAGCTAGATCACCATCCATGAATTAGAATTAATGTT
GATATTCACCCTAATGATTATATAATTGGACAAGCAATGAAAAATATTCC
TCGAGATCAAAACATCTGTTTTTACTGTAGGAGATGAATTTATTTGAAAA
AAGAATAAAAGAGTGTAGATAAGTTCTTCCTGGAGACTTCCCTAGAATCC
TCAGCCTTTTGTGATTGGTAGATGCAGTTAGGATATAAATTAAATTCATA
TCAGCAAGAGATATTTGAGATAATTCCTTACCAATGGAAAATTCCCTATG
AGATAATCCTGTAAATATAGGAAACTCTCTAAGGGGGTTCATTAGTGCCC
TGGCAACAAACAATATAAGCTAGCTACTCCCTGTTTGCAATCTACAGAGA
AACTAGAGAAAACAAATTAGGTGCTGAAGATCCAATGTGTGCTACACCAG
GAAACACTGCCAATAATTGAGCCATACATAAAAATCTCACACTACCACCA
AAAATCCAATGGCATAAAATAAAATATGAGTTATATAAAGAAATGTATGT
AGTTTAAAGGGG

Query= MSMg01no505_e23.b1 MSMg01no505_e23.b1 CHROMAT_FILE:
MSMg01no505_e23.b1 PHD_FILE: MSMg01no505_e23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:11 2005
         (640 letters)



>mm_chr4_30631988_30633027
          Length = 1040

 Score = 1222 bits (632), Expect = 0.0
 Identities = 635/636 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcataatccactaagatagtttaaattcatcatgccacccacagatctgccctcag 64
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcataagccactaagatagtttaaattcatcatgccacccacagatctgccctcag 264

                                                                       
Query: 65  tcatatctgggacaaaacacacagagccccatctaccatcctgaagtgcagggatagaat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcatatctgggacaaaacacacagagccccatctaccatcctgaagtgcagggatagaat 324

                                                                       
Query: 125 aggaagatagaccaccatgtcacccctaggcctgccctctagtacactacccaggaggct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggaagatagaccaccatgtcacccctaggcctgccctctagtacactacccaggaggct 384

                                                                       
Query: 185 atggacacctgcttgccacaccacaccacacagcataagcaaaggatgttacacatgggg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atggacacctgcttgccacaccacaccacacagcataagcaaaggatgttacacatgggg 444

                                                                       
Query: 245 ccactatcttcatgctcatcctgcagtgggagccaccacattgtgacagttaaatgagag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccactatcttcatgctcatcctgcagtgggagccaccacattgtgacagttaaatgagag 504

                                                                       
Query: 305 agaaagaattggaacaccttcagtatcagtatcatgaagagaggtaaaactggagatgag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agaaagaattggaacaccttcagtatcagtatcatgaagagaggtaaaactggagatgag 564

                                                                       
Query: 365 ggtaaagaggagtagcctgctataagcaggcaaccctgccacctcaggatatggtgagat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggtaaagaggagtagcctgctataagcaggcaaccctgccacctcaggatatggtgagat 624

                                                                       
Query: 425 tccagcccaagttgtcactgagggccatgtctaggtcaggtatcagtctcattgtctatg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tccagcccaagttgtcactgagggccatgtctaggtcaggtatcagtctcattgtctatg 684

                                                                       
Query: 485 gctcatattaccactaaagaacatggggacatgtctggtcagggtagcttctggggagga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gctcatattaccactaaagaacatggggacatgtctggtcagggtagcttctggggagga 744

                                                                       
Query: 545 cataggtgtccaagggctgtgcagaattgcccttgccactcactgactttggtgctctgg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cataggtgtccaagggctgtgcagaattgcccttgccactcactgactttggtgctctgg 804

                                               
Query: 605 atagctgaacccctgtctcaataacagcagtactca 640
           ||||||||||||||||||||||||||||||||||||
Sbjct: 805 atagctgaacccctgtctcaataacagcagtactca 840


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space:   648900
Effective search space used:   648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)