AAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXAATGCAGAGAGATGGC
GCGGNAATCTTGGAATTTTCCAGAAGGATATAAATGCTAGAGCCCCAATA
GGTGAAGTTGGTGGTAGTTCAGGTGGGGGCAGGGGAGGGGGGACAACATT
GGTTATGGTTTGTTAGTAATCATGCTCAAAGAAACAAACAAAAGGGAATA
AATTATAGTTTCCCAATTCCTCTCTCCCCTCTATCCTTTTTTCTCTCCTG
TCTAGTGTTAAGGGATGACACATGAGAGGATAAAGAGTAGAAAAAGAAGA
AACCACAAAGTAGCAAAGATGAGCTTATTTTTATGGCTTCAATTGTAAAA
TACCTGGATACATATAGGATTGTTTTCATTTTTGATGTTGTTGTTGTTGG
GTTTTGTTGTTTTTGTTTTTGGAGATAGGGTTTCTCTGTGTAGCCCTGGC
TGTCCTTGGAACTCTGTAGACCTGACTGGACTCAAACTCACAGAGATCTT
CTGCCTTTCCCTAGAATTTAAGGTGAAGTGCTAGGATTAAAGGCATGCAC
CACTATGGGCCCCTTCATTTCTTTTTTTTTAAAAGATTTATTTATTTATT
ATATGTAAGTTCACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGAGTCA
GATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAA
CTCCGGATCTTCGGAAGAGTAGTCGGATGCTCTTACCACTGAGCCATCTC
AC

ACCCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTATGTAGACTAGGATGGCCTTGC
ATCCACAGAGAACCACCTGCCTCTGCCTCCCAAGGAGAACTCTAAGGATA
GACTATCTACTGCTCTCCAGTTGCCTCTGGCCTCTTGGGCCTGATTGAGA
GCCGTGTTTCTGACTCATTTTGCTTAAGGGATTCCTGGTTTGGTTTATTC
AGCTTGTTATTTTCTCCATCTCCAAATGGAATTCACAGGGTCTGCTTCTG
TCCTACAGCCCAATAACTGACCTGATAGTTTTCAGCATCGAGGGCTTCTC
TTGTGCCGGGCTTTGTAGGCTAACATTTTGTTCAAATCATCATAACAACA
GTGTAAGACCCTTAAAAATTTCCACTGTGTGAATGGGCCCAGGACAGAGC
CCAGAGCCCTGTGAGTGGATATCGAGGGTACTTGAGATAACCCTGCAGCA
CCAGTGAGGTCCAGACCCCTGTTCCTCCAGCAGCCACTGAATTTTTTTCA
GAGGGATTGCACTGGGACCCCAGGCCTTTCATTACAAAGATCTTGGAGTC
TCTATGTCTGGGAGGTGAAGACAGGTATAAAGTCCTTTGGCTCGTTATAG
AGTCCTAAAGAAACATTGAGGAGGGAGGGTGTGGAAGGTAAGGGACACAG
TGATGGGGGACCCACAAACACATATGTCTGTCTTGGGACTCCACATAGAG
AA

Query= MSMg01no506_a13.g1 MSMg01no506_a13.g1 CHROMAT_FILE:
MSMg01no506_a13.g1 PHD_FILE: MSMg01no506_a13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:05 2005
         (636 letters)



>mm_chr4_123397836_123398867
          Length = 1032

 Score = 1091 bits (564), Expect = 0.0
 Identities = 619/644 (96%), Gaps = 12/644 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   actatgtagactaggatggccttgcatccacagagaaccacctgcctctgcctcccaagg 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 actatgtagactaggatgcccttgcatccacagagaaccacctgcctctgcctcccaagg 730

                                                                       
Query: 61  agaactctaaggatagactatctactgctctccagttgcctctggcctcttgggcctgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 agaactctaaggatagactatctactgctctccagttgcctctggcctcttgggcctgat 670

                                                                       
Query: 121 tgagagccgtgtttctgactcattttgcttaagggattcctggtttggtttattcagctt 180
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ----agccgtgtttctgactcattttgcttaagggattcctggtttggtttattcagctt 614

                                                                       
Query: 181 gttattttctccatctccaaatggaattcacagggtctgcttctgtcctacagcccaata 240
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ggtattttctccatctccaaatggaattcacagggtctgcttctgtcctacagcccaata 554

                                                                       
Query: 241 actgacctgatagttttcagcatcgagggcttctcttgtgccgggctttgtaggctaaca 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 actgacctgagagttttcagcatcgagggcttctcttgtgccgggctttgtaggctaaca 494

                                                                       
Query: 301 ttttgttcaaatcatcataacaacagtgtaagacccttaaaaatttccactgtgtgaatg 360
           ||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 493 ttttgttcagatcatcataacaacagtgtaagacacttaaaagtttccactgtgtgaatg 434

                                                                       
Query: 361 ggcccaggacagagcccagagccctgtgagtggatatcgagggtacttgagataaccctg 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 433 ggcccaggacagagcccagagccctgtgagtggatatcgagggtacttgagatagccctg 374

                                                                       
Query: 421 cagcaccagtgaggtccagacccctgttcctccagcagccactgaatttttttcagaggg 480
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 373 tagcaccagtgaggtccagacccctgttcctccagcagccactgaatttttttcagagga 314

                                                                       
Query: 481 attgcactgggaccccaggcctttcattacaaagatcttgga--------gtctctatgt 532
           ||||||||||| ||||||||||||||||||||||||||||||        ||||||||||
Sbjct: 313 attgcactggggccccaggcctttcattacaaagatcttggagtctctatgtctctatgt 254

                                                                       
Query: 533 ctgggaggtgaagacaggtataaagtcctttggctcgttatagagtcctaaagaaacatt 592
           ||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 253 ctgggaggtgaagacaggtataaagtcctttggttcattatagagtcctaaagagacatt 194

                                                       
Query: 593 gaggagggagggtgtggaaggtaagggacacagtgatgggggac 636
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gaggagggagggtgtggaaggtaagggacacagtgatgggggac 150


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1032
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1022
Effective search space:   639772
Effective search space used:   639772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)