Query= MSMg01no507_h01.b1 MSMg01no507_h01.b1 CHROMAT_FILE:
MSMg01no507_h01.b1 PHD_FILE: MSMg01no507_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:59 2005
(668 letters)
>mm_chr4_150643358_150644426
Length = 1069
Score = 1131 bits (585), Expect = 0.0
Identities = 623/636 (97%), Gaps = 3/636 (0%)
Strand = Plus / Plus
Query: 35 tgaccccacatctgggtaaaaggcatagtcacagagatccccaatctcccgtgtgtcccc 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tgaccccacatctgggtaaaaggcatagtcacagagatccccaatctcccgtgtgtcccc 294
Query: 95 atattatagtctctccattttccttctgtagcttcaactaggaagaagctcaggggatat 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atattatagtctctccattttccttctgtagcttcaactaggaagaagctcaggggatat 354
Query: 155 acagccagggcatcatcagaatg-aaccccaaagagaggatcctagatcttcagagaagc 213
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 355 acagccagggcatcatcaga-tggaaccccaaagagaggatcctagatcttcagagaagc 413
Query: 214 caaaagctccctaaaggatgagtacccccgcttcctcatgagtttctgggggaagggaag 273
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 414 caaaagctccctaaaggatgagtacccccgcttcctcatgagtttctggaggaagggaag 473
Query: 274 ctctgctttcaagtgctgggagctcagaactgcatggtctaaatgcacgtgtatatggtt 333
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 474 ctctgctctcaagtgctgggagctcagaactgcatggtctaaatgcatgtgtatatggtt 533
Query: 334 gaactccgggacctgtggtctgcacctgcgtggtgcgtgtacctgtgtgtgcatgtgtgt 393
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 534 gaactccgggacctgtggtctgcacctgcgtggtgcatgtacctgtgtgtgcatgtgtgt 593
Query: 394 gcatgcatgtatgggtgagcgtatgtcctgactcangaggaggtattgtaccccctgtta 453
||||||| ||||||||||| |||||| |||||||| |||||| |||||||||||||||||
Sbjct: 594 gcatgcacgtatgggtgagtgtatgttctgactcaggaggagatattgtaccccctgtta 653
Query: 454 ctgccaggggaagtcctacccctgtccctcccacagtgctttttctccagctgctgtgaa 513
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 654 ctgccaggggaagtcctacccctgtccctcccacggtgctttttctccagctgctgtgaa 713
Query: 514 gaggaggaggaggcaggaggatggatgtggctcgtggctcattgggtacatctgaacatc 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gaggaggaggaggcaggaggatggatgtggctcgtggctcattgggtacatctgaacatc 773
Query: 574 tgagcagggcattctgggagtgcgtaaggctgaggtcagttcctctccctctttatc-ac 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 774 tgagcagggcattctgggagtgcgtaaggctgaggtcagttcctctccctctttatccac 833
Query: 633 actacccccaaaagccttggacagacacaaccaaga 668
||||||||||||||||||||||||||||||||||||
Sbjct: 834 actacccccaaaagccttggacagacacaaccaaga 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1069
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1059
Effective search space: 696822
Effective search space used: 696822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_h01.g1 MSMg01no507_h01.g1 CHROMAT_FILE:
MSMg01no507_h01.g1 PHD_FILE: MSMg01no507_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:59 2005
(634 letters)
>mm_chr4_150822373_150823406
Length = 1034
Score = 833 bits (431), Expect = 0.0
Identities = 449/455 (98%)
Strand = Plus / Minus
Query: 1 caaggccctgagtggaaggtgtaggcaaggctgaagtcagactcagtgtgagggcagcag 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 caaggccctgtgtggaaggtgtaggcaaggctgaagtcagactcagtgtgagggcagcag 396
Query: 61 cctaggtgcagggaaagcagcctgggaagctgctcaggtcatggataaaggctgggaaat 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cctaggtggagggaaagcagcctgggaagctgctcaggtcatggataaaggctgggaaat 336
Query: 121 gcatggtagtgacagagtctgtgagaaacaatttgtggagctgtccttagcaagtgactg 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 335 gcatggtagtgacagagtctgtgagaaacaatttgtggagctgtcctcagcaagtgactg 276
Query: 181 gattggtggcatttttcccagccctggacaaactggttacttgcttcctggctgcgcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gattggtggcatttttcccagccctggacaaactggttacttgcttcctggctgcgcctg 216
Query: 241 gattattgcgtgggccttttcgtgggtagctttaaatagctgctttctctccccaaataa 300
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 215 gattattgcgtgggccttttcatgggtagctttaaatagctgctttctctctccaaataa 156
Query: 301 ataatcaatgacagacagaagcacaattctatgaactgggggaaaccaaagagtttattg 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aaaatcaatgacagacagaagcacaattctatgaactgggggaaaccaaagagtttattg 96
Query: 361 gggttactggcagagaaagggtgaggagttgcttaaatgagtccaggtctccccaaagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 gggttactggcagagaaagggtgaggagttgcttaaatgagtccaggtctccccaaagtg 36
Query: 421 gccccagcaccagaaagtcaaggacgattgacttt 455
|||||||||||||||||||||||||||||||||||
Sbjct: 35 gccccagcaccagaaagtcaaggacgattgacttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
