Query= MSMg01no510_b16.b1 MSMg01no510_b16.b1 CHROMAT_FILE:
MSMg01no510_b16.b1 PHD_FILE: MSMg01no510_b16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:36 2005
(361 letters)
>mm_chr4_103295869_103296626
Length = 758
Score = 621 bits (321), Expect = 0.0
Identities = 341/349 (97%), Gaps = 3/349 (0%)
Strand = Plus / Minus
Query: 13 cttatgacattagaacatcctaaatgaagtggtcattcaactgcaaccatatgtctgcac 72
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 558 cttatgacattagaacatcctaaatgaagtggtcattcaactgcagccatatgtctgtac 499
Query: 73 gaactgttatggtatgcctaggatgaaggaggaaaacgaactgtccctgtccgtgaagga 132
||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 498 taactgttatggtatgcctaggat---ggaggaaaatgaactgtccctgtccgtgaagga 442
Query: 133 acatacagtctattggaagatatagaccctgggaactcctgacacccacttcaaaaactg 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatacagtctattggaagatatagaccctgggaactcctgacacccacttcaaaaactg 382
Query: 193 tatgtaacaagaaccgagggaacaggaactccacacaagaaaggggtctttgagtaatgc 252
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 tatgtaacaagaaccgagggaacaggaacttcacacaagaaaggggtctttgagtaatgc 322
Query: 253 atcttataagatggctctcgaggggtgagttcagctcactagactgaagaacaatgaggt 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcttataagatggctctcgaggggtgagttcagctcactagactgaagaacaatgaggt 262
Query: 313 ggttctgaaatggggaaagtagcaaaggtcaagatacatgtggggtgcc 361
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttctgaaatggggaaagtagcaaaggtcaagatacatgtggggtgcc 213
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 758
Length adjustment: 9
Effective length of query: 352
Effective length of database: 749
Effective search space: 263648
Effective search space used: 263648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_b16.g1 MSMg01no510_b16.g1 CHROMAT_FILE:
MSMg01no510_b16.g1 PHD_FILE: MSMg01no510_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:36 2005
(244 letters)
>mm_chr4_103120066_103120709
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 1 ttcctagagagcattccgccttaaacaggtcaaagcacaacagatgccatcgttttcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcctagagagcattccgccttaaacaggtcaaagcacaacagatgccatcgttttcagt 260
Query: 61 ttcatttgtagagggcagatgcttgctgccctggtcatgacatggggagagtatacaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcatttgtagagggcagatgcttgctgccctggtcatgacatggggagagtatacaaag 320
Query: 121 gcttgtgttctgaaagcttagccccactgtcatggagctgagagctggtggagttttaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttgtgttctgaaagcttagccccactgtcatggagctgagagctggtggagttttaag 380
Query: 181 aggggtggcctagcagaggctgggttggcccgccatcttgacttactccaggcctcccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggggtggcctagcagaggctgggttggcccgccatcttgacttactccaggcctcccag 440
Query: 241 ctac 244
||||
Sbjct: 441 ctac 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
