Query= MSMg01no510_e05.b1 MSMg01no510_e05.b1 CHROMAT_FILE:
MSMg01no510_e05.b1 PHD_FILE: MSMg01no510_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:48 2005
(661 letters)
>mm_chr4_144664251_144665303
Length = 1053
Score = 1228 bits (635), Expect = 0.0
Identities = 651/661 (98%), Gaps = 8/661 (1%)
Strand = Plus / Plus
Query: 1 ctggtcagtgttgcttaatgctaggctccatgcttgcaggtgggggtgggggagcggaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggtcagtgttgcttaatgctaggctccatgcttgcaggtgggggtgggggagcggaa- 259
Query: 61 acgggaaaaggaagggtggaagggggatccttaaagaaaaaaagagttgagacactggag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 -------aaggaagggtggaagggggatccttaaagaaaaaaagagttgagacactggag 312
Query: 121 agatcaagctacaaatgaggatgtggacaagtctctcaaggtagaccctgagcctgagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agatcaagctacaaatgaggatgtggacaagtctctcaaggtagaccctgagcctgagag 372
Query: 181 atggtaaagaaagaagggatcggctgccacctgtctcttcggaaactgcctaaaatataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atggtaaagaaagaagggatcggctgccacctgtctcttcggaaactgcctaaaatataa 432
Query: 241 aaccagtgtttagttagaatattctgctttgcatcaacagtcatgtccagaattacccgg 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaccagtgaatagttagaatattctgctttgcatcaacagtcatgtccagaattacccgg 492
Query: 301 agaacgtgtaggtggcagcaatgtaaatgaaattttcatagtacaactgtcggttattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agaacgtgtaggtggcagcaatgtaaatgaaattttcatagtacaactgtcggttattct 552
Query: 361 ggaagtcattcatgttgcagttaatctccgatgagcctgcgcccttaacggtcagtgtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ggaagtcattcatgttgcagttaatctccgatgagcctgcgcccttaacggtcagtgtga 612
Query: 421 tgaagggtgggagggtgggctcatcccaggcataatccagtgacatcatgggcttcactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tgaagggtgggagggtgggctcatcccaggcataatccagtgacatcatgggcttcactt 672
Query: 481 cagtccgaagcctgggttcagctacaccatgctgagtgaagacaacaggaacctagaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cagtccgaagcctgggttcagctacaccatgctgagtgaagacaacaggaacctagaggg 732
Query: 541 cagagggcttcattcagggcagtgtccactgtggcactcacacactcaaacacagactaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 cagagggcttcattcagggcagtgtccactgtggcactcacacactcaaacacagactaa 792
Query: 601 aataagaaacagaacctttatgatttccacttaacatttaggactatagaaatgctcact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 aataagaaacagaacctttatgatttccacttaacatttaggactatagaaatgctcact 852
Query: 661 g 661
|
Sbjct: 853 g 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1053
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1043
Effective search space: 678993
Effective search space used: 678993
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_e05.g1 MSMg01no510_e05.g1 CHROMAT_FILE:
MSMg01no510_e05.g1 PHD_FILE: MSMg01no510_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:48 2005
(239 letters)
>mm_chr4_144852498_144853136
Length = 639
Score = 439 bits (227), Expect = e-128
Identities = 236/239 (98%)
Strand = Plus / Minus
Query: 1 ctagactcaagggccagtgtagggatcacaagtcctgtggtcttcaaatatgacatgcat 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ctagactcaagtgccagtgtagggatcacaagtcctgtggtcttcaaatatgacatgcat 258
Query: 61 cgtgtttgctctatcactagcaagtatattcagagcctagaccccaggtaccggaagtct 120
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 257 cgtgtttgctctatcactagcaagtagattcagagcctagaccccaggtaccagaagtct 198
Query: 121 tacacgcgttctcgcgaccagccaggaagaacgcaacaaaccggaatcttctgcggcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tacacgcgttctcgcgaccagccaggaagaacgcaacaaaccggaatcttctgcggcaaa 138
Query: 181 gctttattgcttacatcttcaggagccagagtgcaagagagcaagagctctattgctta 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gctttattgcttacatcttcaggagccagagtgcaagagagcaagagctctattgctta 79
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
