Query= MSMg01no513_h14.b1 MSMg01no513_h14.b1 CHROMAT_FILE:
MSMg01no513_h14.b1 PHD_FILE: MSMg01no513_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:59 2005
(644 letters)
>mm_chr4_144735279_144736322
Length = 1044
Score = 1224 bits (633), Expect = 0.0
Identities = 639/641 (99%)
Strand = Plus / Plus
Query: 4 ggaattctctattagaagcttcattacactaatgtaactccaactactgaaaatactatt 63
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctaacagaagcttcattacactaatgtaactccaactactgaaaatactatt 263
Query: 64 atgtcatcagcccctagctcttctgccctagggactgggcactgagaagaaaggcgcagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atgtcatcagcccctagctcttctgccctagggactgggcactgagaagaaaggcgcagg 323
Query: 124 agatgggaggataggtatgccagcatccttctcctcgaagtctgcacagagtaggggctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agatgggaggataggtatgccagcatccttctcctcgaagtctgcacagagtaggggctc 383
Query: 184 aggatttgccagggtaagaaactccaagaggaaaaaaggaaaacaaaggcagaaggaagg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aggatttgccagggtaagaaactccaagaggaaaaaaggaaaacaaaggcagaaggaagg 443
Query: 244 gaaagtagcataaagggcaagcaagtggaaggaacattgttgtcagagcaggaccttaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaaagtagcataaagggcaagcaagtggaaggaacattgttgtcagagcaggaccttaag 503
Query: 304 cagagatgttctcattcccgacagggaccacagaaggatcacaagacatcaggagcccaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cagagatgttctcattcccgacagggaccacagaaggatcacaagacatcaggagcccaa 563
Query: 364 aaaaggcaaaataaaatccctaggcatcaaatctccaatgagcagacaccctaggtctaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaaaggcaaaataaaatccctaggcatcaaatctccaatgagcagacaccctaggtctaa 623
Query: 424 aaatgctttgtgggaatgaccccagatgttgcttcccaaacctacttcatggcatggcac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaatgctttgtgggaatgaccccagatgttgcttcccaaacctacttcatggcatggcac 683
Query: 484 cttcacatcactgagaaagaaccagctgtcctctgcctcctgactcaagagtaacaagaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cttcacatcactgagaaagaaccagctgtcctctgcctcctgactcaagagtaacaagaa 743
Query: 544 gcacttgccacttgggtgcacctgaatctgatccacctactcctaatcccagaggcaggc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gcacttgccacttgggtgcacctgaatctgatccacctactcctaatcccagaggcaggc 803
Query: 604 tgaagtcatggggaaggaggagcccaaatggctatggagac 644
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgaagtcatggggaaggaggagcccaaatggctatggagac 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_h14.g1 MSMg01no513_h14.g1 CHROMAT_FILE:
MSMg01no513_h14.g1 PHD_FILE: MSMg01no513_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:59 2005
(572 letters)
>mm_chr4_144900601_144901570
Length = 970
Score = 1094 bits (566), Expect = 0.0
Identities = 570/572 (99%), Gaps = 2/572 (0%)
Strand = Plus / Minus
Query: 1 tcatgaatgagtctttgcagcatgcagctctgctaataggctgtcactgatgaagcatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 tcatgaatgagtctttgcagcatgcagctctgctaataggctgtcactgatgaagcatgc 711
Query: 61 ccagtcatcttgcacagtagggctaactgtggcggtcttggtattcaacagagggcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ccagtcatcttgcacagtagggctaactgtggcggtcttggtattcaacagagggcaaga 651
Query: 121 gaactttcttggattcctgtagaaaagtaactttcagaaccattcaaatcctgactagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gaactttcttggattcctgtagaaaagtaactttcagaaccattcaaatcctgactagag 591
Query: 181 gcagaattccatgggataccccagaaacagaggaggaaaccaaaatgggaagagagggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gcagaattccatgggataccccagaaacagaggaggaaaccaaaatgggaagagagggga 531
Query: 241 aaaggagactatagcttctcttaattgaaggctgccttcctcaattgaggttcacaagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aaaggagactatagcttctcttaattgaaggctgccttcctcaattgaggttcacaagca 471
Query: 301 acaagggttccaaggccaaggcagggcagctgcattactcagctcgagagcagttctgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 acaagggttccaaggccaaggcagggcagctgcattactcagctcgagagcagttctgtt 411
Query: 361 gagactaggacagcccttactggaactttcagtggtatctactcatatctgaccaaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gagactaggacagcccttactggaactttcagtggtatctactcatatctgaccaaaata 351
Query: 421 cttcttgagtaggagtgattcatttctaggtctgcacatactggcatccgatgcatctca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cttcttgagtaggagtgattcatttctaggtctgcacatactggcatccgatgcatctca 291
Query: 481 ggacagaagaaaagggggggggggggaccctgaggctggaggtcattgcacaggcagctt 540
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ggacagaagaaaa--gggggggggggaccctgaggctggaggtcattgcacaggcagctt 233
Query: 541 aagcccaggttggacctgtgtggtttctgttg 572
||||||||||||||||||||||||||||||||
Sbjct: 232 aagcccaggttggacctgtgtggtttctgttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 970
Length adjustment: 10
Effective length of query: 562
Effective length of database: 960
Effective search space: 539520
Effective search space used: 539520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
