Query= MSMg01no514_p02.b1 MSMg01no514_p02.b1 CHROMAT_FILE:
MSMg01no514_p02.b1 PHD_FILE: MSMg01no514_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:02 2005
(477 letters)
>mm_chr4_103136077_103136957
Length = 881
Score = 741 bits (383), Expect = 0.0
Identities = 437/457 (95%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 25 ggaaggctggccttgaaaaagagccactcatagccagaggcacaagaaggtggaaaggga 84
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 681 ggaaggctggccttgaaaaagagccactcaaagccagaggcacaagaaggtggaaaggga 622
Query: 85 agccaatggagggcaacctggtttgctgcctctcgctccttcatcatctgtgagcaccgt 144
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 cgccaagggagggcaacctggtttgcttcctctcgctccttcatcatctgtgagcaccgt 562
Query: 145 ctactgacc----aagtctatttggaaggtggttgggttgggaacttcagggttacaagt 200
||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 ctactgaccaagtaagtctatttggaaggtggttgggttgagaacttcagggttacaagt 502
Query: 201 ttcttaaatggagagagtagagtagagtgggtttaagaacagacagataaattacaacca 260
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 501 tccttaaatggagagagtagagtagagtggggttaagaacagacagataaattacgacca 442
Query: 261 cagaaaggaatatgtgaactgattcaagcactggacgggagagcccaagcttgctgagcc 320
|||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 cagagagaaatatgtgaactgattcaagcactggacgggagagcccaaacttgctgagcc 382
Query: 321 acccccagtgcttcagatagcccagtacatgatttcctcagctctatagccatcccacca 380
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 acccccactgcttcagatagcccagtacatgatttcctcagctctatagccatcccatca 322
Query: 381 cacaacatttattagagcttctccaacactgacaagctggaacccccctcagacctttac 440
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 321 gacaacatttattagagcttctccaacactgacaagctggaactcccctcagaccattac 262
Query: 441 ctcttcctgaatctgaatttacaggagttacctgaga 477
|||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcttcctgaatctgaatttacaggagttacctgaga 225
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 881
Length adjustment: 10
Effective length of query: 467
Effective length of database: 871
Effective search space: 406757
Effective search space used: 406757
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_p02.g1 MSMg01no514_p02.g1 CHROMAT_FILE:
MSMg01no514_p02.g1 PHD_FILE: MSMg01no514_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:02 2005
(506 letters)
>mm_chr4_102959769_102960673
Length = 905
Score = 801 bits (414), Expect = 0.0
Identities = 476/506 (94%), Gaps = 17/506 (3%)
Strand = Plus / Plus
Query: 1 catggagggcatttcatttcctgtttccagcatagaagtggagatgcgaaaatgccttct 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 catggagggcatttcatttcctgtttccagcatagaagtggagattcgaaaatgccttct 260
Query: 61 agtggagacaaactattctcggtgagaaataagattagcacaatgaagagaataggtttc 120
|||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 agtggaga-aaactattctcggtgagaaataagattagcacattgaagagaataggtttt 319
Query: 121 tcaaatgggaaaaggcacaaatgatgcaagagcagcagatctgctacttacttatgctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcaaatgggaaaaggcacaaatgatgcaagagcagcagatctgctacttacttatgctaa 379
Query: 181 ggagaaaagcaggctgctctggaaaagtggtctctcaactggtgggtcccaacccccttg 240
||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 380 ggagaaaagcaggctgctctggaaaagtggt------------gggtcccaacccccttg 427
Query: 241 gggggaggtcacaaaccagatagctggcatatcagatatttatattacaattcataacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gggggaggtcacaaaccagatagctggcatatcagatatttatattacaattcataacag 487
Query: 301 gagcaaagtgtcagttatgaagtagcaacagaaatagtttattttgggggggggagagga 360
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 488 gagcaaagtgtcagttatgaagtagcaacagaaacagtttattttttgggggggagagga 547
Query: 361 actgtattaaagggtagcagcatcaggatggttgagacccactgatttagagtgaggtgt 420
|||||||||||||||| ||||||||||||||||||||| || |||||||||||||||
Sbjct: 548 actgtattaaagggtaccagcatcaggatggttgagac----tgctttagagtgaggtgt 603
Query: 421 cccaagtcacttatctttagcatcttcccatcttcagcatctcaatcaacatgataaggt 480
|||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 604 cccaggtcactcatctttagcatcttcccatcgtcagcatcccaatcaacatgataaggt 663
Query: 481 acaaaatgtctccttattttatacaa 506
|||||||||||||| |||||||||||
Sbjct: 664 acaaaatgtctcctcattttatacaa 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 905
Length adjustment: 10
Effective length of query: 496
Effective length of database: 895
Effective search space: 443920
Effective search space used: 443920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
