NNTTCCTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCTGCAACTGCCTCCTTCTCAAACTGAACCAGATCAGTTCT
GTGACCAAGACTATGCAGGCGTGTAAGCTGGCCCAGTCCAATGTCTGGGC
CGTCATGGTGTTCCATCGATCTAGGAAGACTGAGAATACTTTCATTGTTG
ACCTAGTGCTAAAGCTCTGCACTGGGCAGAACAAATACGGTGCCCCTTGC
CGATCTGAGTGCCTGGCCAAGTACAATCAGATCCTGAAAATCGAGGAAGA
GCTGGGCAGCAAAACCAAGTTTGCTTGCAGGTACTTTAGGCCAATTAAAG
CAAGGACTTGAGATCGCTGTCCCTGGTGCTTAGGACTTCCCTGTCCCAGA
TGTCATCGAGGCAGCTCAAGGCCAGTCCAGTGCTTGCCTTTCCCAAGTCA
CTGCTTTACTAGATGTCCAGAGCTATGCCTGACCACCTGGAACCCCGCTG
GGGACTCCAGGTTTGTGATCATCTGATTGGTTTGAGTCATTGTTTCTGTC
ACCTGACTTCCCAGCTAGTGCCTGGACCCCTCAGAATTCCAGTGTAATCT
GTAGAGTTGCTACAGGCAAAAATCCCCAGTGGTTTACATGCAAAATAAAA
GCCCCAGGATCTCACTCACCCCCAGAAGCCATCAGAATTCATAGTTGCTC
TTCTAGGGCCTCTTTAGAGCTCTCAAATCAACTTCCTGCTTTTCAGATAT
TTAGATTATGTTG

NNNCCCATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATT
GCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAAT
GCAAATCAAAACAACACTGAGATTCCACTTCACTCCAGTCAGAATGGCAA
AGATCAAAATCTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGA
GGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTG
GAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACTGGAGG
ATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCTGT
AAGAAGAACACATGCTCCACTATGTTCATAGCAGCCTTGTTTATAATAGC
CAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGTATACAGA
AAATGTGGTACATTTACACAATGGAATACTACTCAGCTATTAAAGAAATG
AATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTG
AGTGAGGTAACACAATCACAAAGGAACTTACACAATATGTACTCACTGAT
AAGTGGATATTAGCCCAGAAACTTAGGATACCCAAGATATAAGATACAAC
TTGCCAAACGCATGAAATTCAAGAAGAACGAAGACCAAAGTGTGGACACT
TTACCCTTTCTTAGAAAG

Query= MSMg01no515_h17.b1 MSMg01no515_h17.b1 CHROMAT_FILE:
MSMg01no515_h17.b1 PHD_FILE: MSMg01no515_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:49 2005
         (696 letters)



>mm_chr4_64517365_64518460
          Length = 1096

 Score = 1315 bits (680), Expect = 0.0
 Identities = 689/692 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctgcaactgcctccttctcaaactgaaccagatcagttctgtgaccaagactat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 gaattcctgcaactgcctccttctcaaactgaaccagatcagttctgtgaccaagactat 837

                                                                       
Query: 65  gcaggcgtgtaagctggcccagtccaatgtctgggccgtcatggtgttccatcgatctag 124
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 836 gcaggcgtgtaagctggccccgtccaatgtctgggccgtcatggtgttccatcgatctag 777

                                                                       
Query: 125 gaagactgagaatactttcattgttgacctagtgctaaagctctgcactgggcagaacaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 gaagactgagaatactttcattgttgacctagtgctaaagctctgcactgggcagaacaa 717

                                                                       
Query: 185 atacggtgccccttgccgatctgagtgcctggccaagtacaatcagatcctgaaaatcga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 atacggtgccccttgccgatctgagtgcctggccaagtacaatcagatcctgaaaatcga 657

                                                                       
Query: 245 ggaagagctgggcagcaaaaccaagtttgcttgcaggtactttaggccaattaaagcaag 304
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 656 ggaagagctgggcagcaaaaccaagtttgcttgcaggtcctttaggccaattaaagcaag 597

                                                                       
Query: 305 gacttgagatcgctgtccctggtgcttaggacttccctgtcccagatgtcatcgaggcag 364
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gacttgagatccctgtccctggtgcttaggacttccctgtcccagatgtcatcgaggcag 537

                                                                       
Query: 365 ctcaaggccagtccagtgcttgcctttcccaagtcactgctttactagatgtccagagct 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ctcaaggccagtccagtgcttgcctttcccaagtcactgctttactagatgtccagagct 477

                                                                       
Query: 425 atgcctgaccacctggaaccccgctggggactccaggtttgtgatcatctgattggtttg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 atgcctgaccacctggaaccccgctggggactccaggtttgtgatcatctgattggtttg 417

                                                                       
Query: 485 agtcattgtttctgtcacctgacttcccagctagtgcctggacccctcagaattccagtg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agtcattgtttctgtcacctgacttcccagctagtgcctggacccctcagaattccagtg 357

                                                                       
Query: 545 taatctgtagagttgctacaggcaaaaatccccagtggtttacatgcaaaataaaagccc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 taatctgtagagttgctacaggcaaaaatccccagtggtttacatgcaaaataaaagccc 297

                                                                       
Query: 605 caggatctcactcacccccagaagccatcagaattcatagttgctcttctagggcctctt 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 caggatctcactcacccccagaagccatcagaattcatagttgctcttctagggcctctt 237

                                           
Query: 665 tagagctctcaaatcaacttcctgcttttcag 696
           ||||||||||||||||||||||||||||||||
Sbjct: 236 tagagctctcaaatcaacttcctgcttttcag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space:   744996
Effective search space used:   744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)