NNNGGCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCTGAGATTCTCCATCAGTACTTTTCTGTTGCTCTGATTA
AACACCATTGCAAAAATATCTTATGCAAAAATGTTTATTCTGGATTACTA
TTCCAAAAGAAGAGAACACAAAGGCAGAGAAGGCATGGCGACAGGCAGCT
AGAACCAGGAGTTGAGAGATTACATCTTCACCTACAAATGATGAAGAGAC
CAAACTGGAAGTAAGAAGAGGCTATAAACCCTAAAAGCCTAACCACAATG
ACTTACTTCCTCCAGCAAGTTTGTACCTCCTGAAAGCCCCATCAAGTGGG
GACAAAGTGATCCAATACCTGAACCTGTAGTGGACATTTCTCACTCAAAC
CACTGCATTCTACTCCCTGGCTCCACCCTCGCCTCATTGCTACATCATAA
TACAAAAGGAATTTAGTCCGACTTTTCAAAGCTCCTGTAATCCTTAACAA
TTTCAACATTGTTTAAAAGTTCACAGTATCTTCTGAGATTTGAGGCAATC
TCTTAATTCAATATCCTATAAAGTCAAATAATTACATATTCCCAACATAC
AGTGGCTCAGAATATTCACTGTGATTCCAAAAGACAGGATTGGAGTCACA
GTAAGAAAATATTGGACCAAAGCAAGACTGAAACCCAGCAGGACAAATTC
CAAACCCTGTAGCCTCCATTCTGATGTCAGAGAGCTTAGCTCCACATCN

NNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATCATCTCCATGTGGTTTCTAAT
ACTGACTGAACTACAGCTTAAGATATGAACTGAATGCTGTCAGAAAGCAT
GCAACTCATGGTGGAGATATTTTTCCATTGACAGACATAACTTCAGAGCC
CAAAGATATCTGCTTGTTCTGTTTTCAAATTTTTCAAGTGTTACTTTCAC
CTTGAAAATATCAAGTGAAATTTTGCCAAGCTTGTGGGCAAAATTCCATG
TGAATACATGTACCTGTTCATGTATTGTATACCCACATTTTTCTATCAGT
AGATCTATGGAGAAAGTCAATAGAAGAGCAATTATTGTACTAGCCATGGC
CAGTGAGCTCTGTGGAGTACTATGATTAGAGGCACAGCTCTTCCACTGGG
GACTCTGAGCTTCAAACTCCTTGCCAGTAAAATAAGGACAATAGAAATAA
AAGAGGAGATAGAAATCAGTCAGGCAGTTTGATGGACAAGGATCAAAATT
CTTATCTATAGCCCAGAACTAGAATTGTTCTTGGTTTTGTCCTAGAAGTG
TTTAGAGGATTTCCTGCCTGATTTTGCTTCTCCTTTTACATGACTGCCTG
GAAGCCTTTTGTGAGGGTGTGAATGGAACTCTAGTACACACTTGAGGAGA
GGCACAAATATCTTCTCCTATAATGTCTATAAAACATCCCTAAATT

Query= MSMg01no516_e11.g1 MSMg01no516_e11.g1 CHROMAT_FILE:
MSMg01no516_e11.g1 PHD_FILE: MSMg01no516_e11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:56 2005
         (517 letters)



>mm_chr4_71878821_71879737
          Length = 917

 Score =  992 bits (513), Expect = 0.0
 Identities = 516/517 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcatctccatgtggtttctaatactgactgaactacagcttaagatatgaactgaatgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 atcatctccatgtggtttctaatactgactgaactacagcttaagatatgaactgaatgc 516

                                                                       
Query: 61  tgtcagaaagcatgcaactcatggtggagatatttttccattgacagacataacttcaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tgtcagaaagcatgcaactcatggtggagatatttttccattgacagacataacttcaga 456

                                                                       
Query: 121 gcccaaagatatctgcttgttctgttttcaaatttttcaagtgttactttcaccttgaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gcccaaagatatctgcttgttctgttttcaaatttttcaagtgttactttcaccttgaaa 396

                                                                       
Query: 181 atatcaagtgaaattttgccaagcttgtgggcaaaattccatgtgaatacatgtacctgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atatcaagtgaaattttgccaagcttgtgggcaaaattccatgtgaatacatgtacctgt 336

                                                                       
Query: 241 tcatgtattgtatacccacatttttctatcagtagatctatggagaaagtcaatagaaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcatgtattgtatacccacatttttctatcagtagatctatggagaaagtcaatagaaga 276

                                                                       
Query: 301 gcaattattgtactagccatggccagtgagctctgtggagtactatgattagaggcacag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gcaattattgtactagccatggccagtgagctctgtggagtactatgattagaggcacag 216

                                                                       
Query: 361 ctcttccactggggactctgagcttcaaactccttgccagtaaaataaggacaatagaaa 420
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 215 ctcttccactggggactctgagcttcaaactccttgccagtgaaataaggacaatagaaa 156

                                                                       
Query: 421 taaaagaggagatagaaatcagtcaggcagtttgatggacaaggatcaaaattcttatct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 taaaagaggagatagaaatcagtcaggcagtttgatggacaaggatcaaaattcttatct 96

                                                
Query: 481 atagcccagaactagaattgttcttggttttgtccta 517
           |||||||||||||||||||||||||||||||||||||
Sbjct: 95  atagcccagaactagaattgttcttggttttgtccta 59


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space:   459849
Effective search space used:   459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)