XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCC
TGATTTCACCCTGATGCCAGCTCATATCTATTGTATCAGCAATTATAAAT
GTGTTATTCAAAGCTTAAGGTCAGGGCCAATATCACCCCACCACCACCAA
GTCCTAAAATCTAGTGGGTCCCAAGACTCAGCTCTCCTCTCTTGATGCCA
TCCCAGGATGAACTCACCCATACTGACACCTCCCAACCTCATGACTCCAG
CCAGCTCATTTCCAGTACACAATTACAATTGCTTTACTCTATATTTTTCA
CATCTCTGCTACACTGGCTGCTTCTTCAGGCCTGTTAAAATATAACCGCC
TCTGATATACTTCCCCCAGATCCCCATGCCCACTATCTTACCTTAATACT
CTCTGAAATTCATTTGTTAATTGTCCCTCTTTCCTACCAAATTAGCCCAC
ACCACTAAAGTAGTTACTTACTGTGCTGTCTCTGCCGCCTCAGACAGTTT
CTGGGATAATGTTTACAACATTAAATATGTGCTGGATGAAATAATGTCTA
ACACAGTCTGGCACATAATTCTTACTGACACTTGAATGCTTGCTAATTGC
CCTATATTGTGTTAAATGTGCCACAGGAATTACTTTGTCTTAAGACTACA
ATTGGTTCTGTTTTATACTGAGACCTCTAAGGATCATAATTTGTTGGAAT
CCCAGTTAACAAGGATACGGGTACCAGTGGCCTTGCTGTGAGTGGCTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAAGGCAAAGGTACTGAGCTGTGATGGTGTGT
GATGATGTGTGGTGGTGGTGGTAGTGGCCCTCCCCCTCTCCTTCCCCCTT
TATTTCTTGCGTTCTCTTTTACCACCNTTTCCCCCTTCGTTTTTTTTTCT
AAACTTCCCCCACCCCCCCCTTTTCCTCCCTTATCTCCCTATTTTTTTCT
TTTTCACTTCTCTTTTCCTTTCTTTTTCCCCTATCTTATTCTCCCCCCTC
CCCTCTTTTCTTCTTTTTTTTTTCTCCTCCCCTCACTTTATTTTCCTTAT
TCCTTCCCCTATTCCCTTCCCCTTTTTTCCCCCCCTTCCTCCCCCCCCCT
AACAATTTTCTTATTCTCCACCCCCCCTTTCCCCCACCCTCCCTCCTTCA
TTCTTTTCCTTTCCACTCAACTCTTCTTCTTCCCTCCCTCTTTTCTTCCT
TCTTCCCCCTTCTTCTCTTTTTTCTTTTCATTACTTTCCATATTCTTACT
CTTCTCCACTTCTTTTTCTTCTTTTAACATCTTCCTCCCACTTCCCCTAT
TTTTCTCCCTAACCTCTCCTTCTTTTTTTCCTATTCCTATATTTTCAACA
CTTTTTCCCCCCCCCTCTCCTCATTCCCCTTATTTCATACCTTATCTCTC
CCTCTTTCATATCTACCCACCCTCCCATCATTCCTATCCCTCCTCACCTT
TCACTTATCTCTTACTAGCCAATTCTATCTTTCCATTCTTCCCCTCCCCA
CACCCATTTATCTTTCTCCCCTCCATAACCACTTTATATACCAATTCCCT
N

Query= MSMg01no517_k07.b1 MSMg01no517_k07.b1 CHROMAT_FILE:
MSMg01no517_k07.b1 PHD_FILE: MSMg01no517_k07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:48 2005
         (665 letters)



>mm_chr4_120639303_120640367
          Length = 1065

 Score = 1234 bits (638), Expect = 0.0
 Identities = 656/662 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcctgatttcaccctgatgccagctcatatctattgtatcagcaattataaatgt 63
           |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctgacggcaccctgatgccagctcatatctattgtatcagcaattataaatgt 263

                                                                       
Query: 64  gttattcaaagcttaaggtcagggccaatatcaccccaccaccaccaagtcctaaaatct 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gttattcaaagcttaaggtcagggccaatatcaccccaccaccaccaagtcctaaaatct 323

                                                                       
Query: 124 agtgggtcccaagactcagctctcctctcttgatgccatcccaggatgaactcacccata 183
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 324 agtgggtcccaagactcagctctcctctcttgatgccatcccaggatgaactcatccata 383

                                                                       
Query: 184 ctgacacctcccaacctcatgactccagccagctcatttccagtacacaattacaattgc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgacacctcccaacctcatgactccagccagctcatttccagtacacaattacaattgc 443

                                                                       
Query: 244 tttactctatatttttcacatctctgctacactggctgcttcttcaggcctgttaaaata 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttactctatatttttcacatctctgctacactggctgcttcttcaggcctgttaaaata 503

                                                                       
Query: 304 taaccgcctctgatatacttcccccagatccccatgcccactatcttaccttaatactct 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taaccgcctctgatatacttcccccagatccccatgcccactatcttaccttaatactct 563

                                                                       
Query: 364 ctgaaattcatttgttaattgtccctctttcctaccaaattagcccacaccactaaagta 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctgaaattcatttgttaattgtccctctttcctaccaaattagcccacaccactaaagta 623

                                                                       
Query: 424 gttacttactgtgctgtctctgccgcctcagacagtttctgggataatgtttacaacatt 483
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 624 gttacttactgtgctgtctctgccgcctcagacagtttctgggatgatgtttacaacatt 683

                                                                       
Query: 484 aaatatgtgctggatgaaataatgtctaacacagtctggcacataattcttactgacact 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaatatgtgctggatgaaataatgtctaacacagtctggcacataattcttactgacact 743

                                                                       
Query: 544 tgaatgcttgctaattgccctatattgtgttaaatgtgccacaggaattactttgtctta 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgaatgcttgctaattgccctatattgtgttaaatgtgccacaggaattactttgtctta 803

                                                                       
Query: 604 agactacaattggttctgttttatactgagacctctaaggatcataatttgttggaatcc 663
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 804 agactacaattggttctgttttatactgagacctctagggatcataatttgttggaatcc 863

             
Query: 664 ca 665
           ||
Sbjct: 864 ca 865


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space:   691025
Effective search space used:   691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)