NAGGAGGGGGGTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTCACCTGTATGATACCAAATGGCTGAGAAGCACCTGA
AAAAATGTTCAACATCCTCAATCATCTGGGAAATGCAAATCAAAACAACC
CTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATAAAAAATTCAGG
TGACAGCAGATGCTGGTGATGATGTGGAGAAAGAGGGACACTCCTCCATT
GTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGATGG
TTCCTCAGAAAATTGGACATAGTACTACCAGAGGATCCCACAATACCTCT
CCTGGGCATATATCCAGAATATGTTCCAACTGGTAAGAAGGACACATGCT
CCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAA
CCCAGATGGCCCTCAACAGAGGAATGGATACAGAAAATGTGCTACATTTA
CACAATGAAGTACTACTCATCTATTAAAAAGAATGAATTTATGAAATTCC
TAGGCAAATGGATGTATCTGGAGGGCATCATCCTGAGTGAGGTAACCCAA
TCACAAAAGAACTCACATGATATTTACTCACTGATAAGTGGATATTAGCC
CAGAAACTTAGAATACCCAAGATATAAGATACAATTTGCAAAACACATGA
AACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTT

NNNNCCCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCTCAGCACTTACAATG
CTTAGGTTTTCCAAAGATTCTGATGCTTAAATGAAAGGGAGAGGGAGCCA
GCAGGCCAGCCAGCCAGCCAGGACACATGCCAAGGAGCCAGCCAGGATGA
GGGGATCACAGCTGCTCACTTGTGCCTGCCTATTGCTTCAGATGGGAAGG
GAAAAATCTTTTGAATCTATTACTGAGGAAAAAAATGGGCCTTTTGGACA
CTGACTCAGAACTCTTGGCCTTGTTTTTGTTGAAACGATATATTGTTTTA
CAAGATCTGAGCTCCAAGCTCACATTCCTGCTCACATCACTGTTATTATT
CCATGGTTTCCACATCATCTCTGTGGCTCTATGCAAAATATATATGAAAA
AAACTAGATAAATTATGCTCACGTGTATGCACATTTGTGGCAGCAGAGAA
TGAGGGATGTAGCAGTGGGAGGATATCACAGGGGAGCAGTAAGGGAGCAC
CCAGGCCACTCAAGTTTTCTTCTGAGTATGGCCGGCAAAGCAGATGTAGT
CAACGCATCATGCTTACAAGTACAGCTGTCTTGTGCAGCGGAAGCAGACC
TTTCTGATGGGATGGATGGAGATCAGTTGTGGATTGTTGGAGTAAAGTCT
AAAAGGAAATCACAAGGCAGTGCTATCTCGATAA

Query= MSMg01no521_a01.g1 MSMg01no521_a01.g1 CHROMAT_FILE:
MSMg01no521_a01.g1 PHD_FILE: MSMg01no521_a01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:12 2005
         (649 letters)



>mm_chr4_10051337_10052386
          Length = 1050

 Score = 1226 bits (634), Expect = 0.0
 Identities = 646/650 (99%), Gaps = 1/650 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctcagcacttacaatgcttaggttttccaaagattctgatgcttaaatgaaagggagag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctcagcacttacaatgcttaggttttccaaagattctgatgcttaaatgaaagggagag 260

                                                                       
Query: 61  ggagccagcaggccagccagccagccaggacacatgccaaggagccagccaggatgaggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagccagcaggccagccagccagccaggacacatgccaaggagccagccaggatgaggg 320

                                                                       
Query: 121 gatcacagctgctcacttgtgcctgcctattgcttcagatgggaagggaaaaatcttttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatcacagctgctcacttgtgcctgcctattgcttcagatgggaagggaaaaatcttttg 380

                                                                       
Query: 181 aatctattactgaggaaaaaaa-tgggccttttggacactgactcagaactcttggcctt 239
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatctattactgaggaaaaaaaatgggccttttggacactgactcagaactcttggcctt 440

                                                                       
Query: 240 gtttttgttgaaacgatatattgttttacaagatctgagctccaagctcacattcctgct 299
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 gtttttgttgaaacgatatattgttttacaagatctgagctccaagcccacattcctgct 500

                                                                       
Query: 300 cacatcactgttattattccatggtttccacatcatctctgtggctctatgcaaaatata 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacatcactgttattattccatggtttccacatcatctctgtggctctatgcaaaatata 560

                                                                       
Query: 360 tatgaaaaaaactagataaattatgctcacgtgtatgcacatttgtggcagcagagaatg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgaaaaaaactagataaattatgctcacgtgtatgcacatttgtggcagcagagaatg 620

                                                                       
Query: 420 agggatgtagcagtgggaggatatcacaggggagcagtaagggagcacccaggccactca 479
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 621 agggatgtagcagtgggaggatgtcacaggggagcagtaagggagcacccaggccactca 680

                                                                       
Query: 480 agttttcttctgagtatggccggcaaagcagatgtagtcaacgcatcatgcttacaagta 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agttttcttctgagtatggccggcaaagcagatgtagtcaacgcatcatgcttacaagta 740

                                                                       
Query: 540 cagctgtcttgtgcagcggaagcagacctttctgatgggatggatggagatcagttgtgg 599
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagctggcttgtgcagcggaagcagacctttctgatgggatggatggagatcagttgtgg 800

                                                             
Query: 600 attgttggagtaaagtctaaaaggaaatcacaaggcagtgctatctcgat 649
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 attgttggagtaaagtctaaaaggaaatcacaaggcagtgctatctcgat 850


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1050
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1040
Effective search space:   664560
Effective search space used:   664560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)