Query= MSMg01no521_o04.b1 MSMg01no521_o04.b1 CHROMAT_FILE:
MSMg01no521_o04.b1 PHD_FILE: MSMg01no521_o04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:20 2005
(441 letters)
>mm_chr4_136675338_136676178
Length = 841
Score = 826 bits (427), Expect = 0.0
Identities = 427/427 (100%)
Strand = Plus / Minus
Query: 1 cattctgcaccttcacctgggtaacaggcttgaccccatttccagaaattcatccgagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cattctgcaccttcacctgggtaacaggcttgaccccatttccagaaattcatccgagga 368
Query: 61 aaacatggacaccccgcccttacgaacccaaggggcagttctgatgacagaactgagggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaacatggacaccccgcccttacgaacccaaggggcagttctgatgacagaactgagggg 308
Query: 121 cttcaaaacttctgggccccacgtacagggcctgtctgcagaccgatatgtacgcagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cttcaaaacttctgggccccacgtacagggcctgtctgcagaccgatatgtacgcagaca 248
Query: 181 tagaatatgctgctgatgggcggggtggccatctcaagcccgggaaagagaatgcagatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tagaatatgctgctgatgggcggggtggccatctcaagcccgggaaagagaatgcagatg 188
Query: 241 tgtgccaccatgcctggttgatgcggtgctggggatcgaacccagagcttcatacaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tgtgccaccatgcctggttgatgcggtgctggggatcgaacccagagcttcatacaaaca 128
Query: 301 ctctaccaactgcactccaccccactccgtctctcttggttttctgggtttcattttagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ctctaccaactgcactccaccccactccgtctctcttggttttctgggtttcattttagc 68
Query: 361 tgatatgccagctctcttctgtttagttttggcacgggatctccaaatgtagcccaacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tgatatgccagctctcttctgtttagttttggcacgggatctccaaatgtagcccaacct 8
Query: 421 ggccttg 427
|||||||
Sbjct: 7 ggccttg 1
Score = 166 bits (86), Expect = 2e-45
Identities = 110/120 (91%), Gaps = 4/120 (3%)
Strand = Plus / Minus
Query: 233 tgcagatgtgtgccaccatgcctggttgatgcggtgctggggatcgaacccagagcttca 292
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 653 tgcaggtgtgtgccaccatgcctggttgatgcagtgctggggatcgaacccagagcttca 594
Query: 293 tacaaacactctaccaactgcactccaccccactccgtctctcttggttttctgggtttc 352
| |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||
Sbjct: 593 t----tcactctaccaactgcactccaccccagtccttctctcttggttttctggatttc 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_o04.g1 MSMg01no521_o04.g1 CHROMAT_FILE:
MSMg01no521_o04.g1 PHD_FILE: MSMg01no521_o04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:21 2005
(426 letters)
>mm_chr4_136499769_136500594
Length = 826
Score = 816 bits (422), Expect = 0.0
Identities = 425/426 (99%)
Strand = Plus / Plus
Query: 1 tcactaagagtcctgccccgttccccacctctgccaaacaagggaacttcctagtctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcactaagagtcctgccccgttccccacctctgccaaacaagggaacttcctagtctttc 260
Query: 61 ccgcaggctggcttgtcttggtgcacgtgggactcactggcttatttgtagagttggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgcaggctggcttgtcttggtgcacgtgggactcactggcttatttgtagagttggtgg 320
Query: 121 catctcaagcttggggttgaggcggtgctaggcaggtggcaccggtcaccctgccttggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catctcaagcttggggttgaggcggtgctaggcaggtggcaccggtcaccctgccttggt 380
Query: 181 catcatgtcatggctgtatctatcaccagtagcctgaaggtgacaggagggttctgaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcatgtcatggctgtatctatcaccagtagcctgaaggtgacaggagggttctgaggg 440
Query: 241 tggagggggagtcccgggcttgggggccaggtagcctgggatcagatccactctgatact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggagggggagtcccgggcttgggggccaggtagcctgggatcagatccactctgatact 500
Query: 301 catggcagagagcctcaggttgtcccatctgcaaagtgggagtgcggcccctcacttaga 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 catggcagagagcctcaggttgtcccatctgcaaagtgggagtgtggcccctcacttaga 560
Query: 361 aggctctcgtaaggatggagacttcccaaaggcgggatcctcctgccctgacttctgtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggctctcgtaaggatggagacttcccaaaggcgggatcctcctgccctgacttctgtgt 620
Query: 421 cctgag 426
||||||
Sbjct: 621 cctgag 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
