NNNNNTTCTATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCCTTCCAATGCTAAGAAGCAATTGTGATGATCCTAGATG
ATCAATAGCTGTAAGTGGAGCCTGGAGTCTGAAGTAGACCAAGAATGCTA
TGAAGTGAGAGTGAAGTTGCATGAAAGACTGAGAAAATGTAATTAAAAAT
GGTCCAGAAAAAAATGGGTGTGTGTAATGGATAGGTGTGACAGATATTAT
GACTATGATGATTATGCTTTCATGGATATGTACAGATGTCAAATTTTATC
AACCTGTACATTATAAATACACAGAATTTAATGTACAACAAATATACCTC
ACTAAAAAAGTTTTTGAAAAGCTCCATAATCGAATTTAGAGTACAAACAC
ACATCACATTACATTTATATACCATTTCATTTTATACACTATAATATAAA
TGAAAGGGTAAGGGGGGAGAGAAGTTTTATATTGCTTGAATGACTGTGTA
TGAGAGACACACACAGAGAGCCAGAAAAATAAAGGGGGTAGACAAGGAAA
AGTAGAGGAAAAAGGTGAGATAGCTACAAAATGTTATCCAGGCAAAGGTG
GCCAACAGTGTGAATGTATATTGCTTGCCTGTCTGTTTCACTCCATGATG
ATAAGGGACTAACCCTCTGAAACTGTAATCAAGCCTACAATTAAATGTTC
TCTTGTATAAGAGTTGCCTTAGTTATAGTATCTCTTTGGAGCAGCAAAAC
AGTAACTAATAN

NNTTTCCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCC
CCATTTTTTAATGGGGTTGTTCAATTTTCTGAAGTCCACCTTCTTGAGTT
CTTTATATATATTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAG
ATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTT
TGCCTTTCTTCTTTTGATGTCTTTTATCTTAGTCAATTATCTTCTTTATC
ATACCGTCTGACCGAAGTATCTTAAGGAAGGGCTGGTTGTGGCTCGCAGT
TTAAGGGCTGAGTTTATCGTGGTGAGGAAGCTAGGGCATCAGGCAGGTGA
AACAACTCATCGTATTTGTCCATATTGAATGCTAGGGCTCTCTTATGTAT
TGTGGGACCCAGCACATGGAATGATTCTGCCCACATTCAGAATGGGTCTT
CTCACCTCTCTTAACTAAATCTAAATAATCCCTCACAAAAATGGCCACTG
GCTAACCAGTCTAAGTAATCCCAATGGACATGCCCCAAAGCTTGCCTTCT
AGGTGATTTTAAAGCCTAGCAAACTGACAATAAATATTAACCATCACACA
TTTAATATTTTAAAGGATTTTCTATACTGTTAACAATTTTATAGTTCAAA
TTATAGGAACGAATAGATGTTTTCAGCGAAGACTTGGTAAAGAGTCCATG
ATTTT

Query= MSMg01no522_b14.b1 MSMg01no522_b14.b1 CHROMAT_FILE:
MSMg01no522_b14.b1 PHD_FILE: MSMg01no522_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:37 2005
         (656 letters)



>mm_chr4_14502837_14503892
          Length = 1056

 Score = 1100 bits (569), Expect = 0.0
 Identities = 621/653 (95%), Gaps = 24/653 (3%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccttccaatgctaagaagcaattgtgatgatcctagatgatcaatagctgtaag 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 204 ggaattccttccaatgctaagaagcaattgtgatgatcctagatgatcaatagctgtaaa 263

                                                                       
Query: 64  tggagcctggagtctgaagtagaccaagaatgctatgaagtgagagtgaagttgcatgaa 123
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 264 tggagcctggagtctgaagtagaccaagaatgctatgaagtgagagcgaagttgcatgaa 323

                                                                       
Query: 124 agactgagaaaatgtaattaaaaatggtccagaaaaaaatgggtgtgtgtaatggatagg 183
           |                       ||||||||||||||||||||||||||||||||||||
Sbjct: 324 a-----------------------tggtccagaaaaaaatgggtgtgtgtaatggatagg 360

                                                                       
Query: 184 tgtgacagatattatgactatgatgattatgctttcatggatatgtacagatgtcaaatt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtgacagatattatgactatgatgattatgctttcatggatatgtacagatgtcaaatt 420

                                                                       
Query: 244 ttatcaacctgtacattataaatacacagaatttaatgtacaacaaatatacctcactaa 303
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttatcaacctgtacattagaaatacacagaatttaatgtacaacaaatatacctcactaa 480

                                                                       
Query: 304 aaaagtttttgaaaagctccataatcgaatttagagtacaaacacacatcacattacatt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 481 aaaagtttttgaaaagctccataatcgaatttagagtacaaacacacatcacattacgtt 540

                                                                       
Query: 364 tatataccatttcattttatacactataatataaatgaaagggtaaggggggagagaagt 423
           | ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 541 tctataccatttcattttatacactataatataaatgaaagggtaagtgggg-gagaagt 599

                                                                       
Query: 424 tttatattgcttgaatgactgtgtatgagagacacacacagagagccagaaaaataaagg 483
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 600 tttatattgcttgaatgactgtgtatgagagacacacacagagagacagaaaaataaagg 659

                                                                       
Query: 484 gggtagacaaggaaaagtagaggaaaaaggtgagatagctacaaaatgttatccaggcaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gggtagacaaggaaaagtagaggaaaaaggtgagatagctacaaaatgttatccaggcaa 719

                                                                       
Query: 544 aggtggccaacagtgtgaatgtatattgcttgcctgtctgtttcactccatgatgataag 603
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aggtagccaacagtgtgaatgtatattgcttgcctgtctgtttcactccatgatgataag 779

                                                                
Query: 604 ggactaaccctctgaaactgtaatcaagcctacaattaaatgttctcttgtat 656
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ggactaaccctctgaaactgtaatcaagcctacaattaaatgttctcttgtat 832


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)