NAAGCCATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTCGCAGTGAAATGACTATGCTAGGTTAATGACATCCTTTA
ACTCCGCTGTTGGGGAAACTCCAGACTGGGTGAAACTCCGGTGTGTTGAT
TAGACTTCCTATGAACTTCCTGTCCTGGTCTAGTACACTGAATGTCCAGA
AAATATCTACTGAAAAGAATACAGAATACACACAGCTCAGTTGCTATCGT
CTGCTGCCCCTGACTGCTAAGCTAAAGAGCACTACTTTCGTAAAGGCTTG
CTTACCCAGGAGTGCTAAGTCTTGCTCTGCCTCGGAAAGGGGCTCCAAGT
TCACAGACTTAATTTTGCTACCTCCGCTACTGTCTGCTCTTCTGGACTCC
AGGTCTCCTCTAACAGCTACAGGAGTCTCCTACATGTGGGGGAGAGACCA
CGTCTCTCCCAAGCAGACACCACCTGCTGCTCTTACCTCCCGGTCTGTAG
ACAACGTCGTCCTCGGTGATGTAAGAAGTTATCTCGCCAGTGTCTGTCCT
CTCGTAGCGGGACTTTTTTTTCGGAGGTTTCTTTCTGCTCTTCTTGTTGG
ACTCCTCCGTGGTGGCGCTGTTGTTGTCGTTGTCTTCGTCCTCGCTGTGA
TCGCTCTCAGCATAGTTTTTGGCTCCTCCCTTCCAAGTACAGCTCCTGCG
AGGCCTGGCATTCTCGCTCTCTCTTGCTTTGTCTCTTTTATCTCTTTN

CCCAGCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCATCAAGCTGTGGTGTGGC
ACGGGGAGTGTCAAGAGGAGGACATCGCTAAGGCGTGGACAAGGGAAGGA
GCGCTGGGCAGACCGAGGGGTGTAAACGGCCATGGGGAGGAGGAGGAGGA
CAGCCATTATTGGAGTCATGGCTCTGGTTTGTTTTAGGAGGCTGAGACTC
GTCCTCTACTGGAGAAAAACCTAAGCTGCGTGCACAGCATGCCTGGAGTC
TTCAAGCACAGCAAATTCAAGGCCAGGCTGGTGCACATGAGGCCATGTTT
TAAAGGGCGGGAAAGACAGTGCCTGTGCCTTTATCCCCAGTTTGATCTGC
AGCTGGAATCAACATGGTGGAAAGAAAGAACCAACTGCCACAAGTTGTTC
TCTGATTCCCTCTTGTGTGCCCTTTAGGCTCTCGATAAACAAGCATGTCA
CACACACACACACACACACACTTCACACTAAATAAATAAGTGGCCAAATT
ACTATTTTTTTTTTTTAAAAAAAAAAAAAAGAGGCCGGGGGAAACTGGCT
CAGTGGGGGTAAAACCTGCTTTATCATGCCATTCTGGGAAACAATTGAAA
ACCCCGGTTTTAAGCCTGGGAAAATGGGGGGGGCCATGGCCTTTTAAACC
CCGGAACCCCCTAAAAGGAAAAACCCAAATTCTCGTTGAGATTTTTCAGG
CCCCAAACTTTTATTTN

Query= MSMg01no522_j01.b1 MSMg01no522_j01.b1 CHROMAT_FILE:
MSMg01no522_j01.b1 PHD_FILE: MSMg01no522_j01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:11 2005
         (588 letters)



>mm_chr4_149780419_149781406
          Length = 988

 Score = 1106 bits (572), Expect = 0.0
 Identities = 581/584 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttcgcagtgaaatgactatgctaggttaatgacatcctttaactccgctgttgg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 gaattcttcgcagtgaaatgactatgctaggttaatgacatcctttaactccgctgttgg 729

                                                                       
Query: 65  ggaaactccagactgggtgaaactccggtgtgttgattagacttcctatgaacttcctgt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ggaaactccagactgggtgaaactccggtgtgttgattagacttcctatgaacttcctgt 669

                                                                       
Query: 125 cctggtctagtacactgaatgtccagaaaatatctactgaaaagaatacagaatacacac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cctggtctagtacactgaatgtccagaaaatatctactgaaaagaatacagaatacacac 609

                                                                       
Query: 185 agctcagttgctatcgtctgctgcccctgactgctaagctaaagagcactactttcgtaa 244
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 608 agctcagttgctatcgtctgctgcccctgactgcaaagctaaagagcactactttcgtaa 549

                                                                       
Query: 245 aggcttgcttacccaggagtgctaagtcttgctctgcctcggaaaggggctccaagttca 304
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aggcttgtttacccaggagtgctaagtcttgctctgcctcggaaaggggctccaagttca 489

                                                                       
Query: 305 cagacttaattttgctacctccgctactgtctgctcttctggactccaggtctcctctaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cagacttaattttgctacctccgctactgtctgctcttctggactccaggtctcctctaa 429

                                                                       
Query: 365 cagctacaggagtctcctacatgtgggggagagaccacgtctctcccaagcagacaccac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cagctacaggagtctcctacatgtgggggagagaccacgtctctcccaagcagacaccac 369

                                                                       
Query: 425 ctgctgctcttacctcccggtctgtagacaacgtcgtcctcggtgatgtaagaagttatc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctgctgctcttacctcccggtctgtagacaacgtcgtcctcggtgatgtaagaagttatc 309

                                                                       
Query: 485 tcgccagtgtctgtcctctcgtagcgggacttttttttcggaggtttctttctgctcttc 544
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tcaccagtgtctgtcctctcgtagcgggacttttttttcggaggtttctttctgctcttc 249

                                                       
Query: 545 ttgttggactcctccgtggtggcgctgttgttgtcgttgtcttc 588
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ttgttggactcctccgtggtggcgctgttgttgtcgttgtcttc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space:   565284
Effective search space used:   565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no522_j01.g1 MSMg01no522_j01.g1 CHROMAT_FILE:
MSMg01no522_j01.g1 PHD_FILE: MSMg01no522_j01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:12 2005
         (405 letters)



>mm_chr4_149641014_149641818
          Length = 805

 Score =  783 bits (405), Expect = 0.0
 Identities = 405/405 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcatcaagctgtggtgtggcacggggagtgtcaagaggaggacatcgctaaggcgtggac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatcaagctgtggtgtggcacggggagtgtcaagaggaggacatcgctaaggcgtggac 260

                                                                       
Query: 61  aagggaaggagcgctgggcagaccgaggggtgtaaacggccatggggaggaggaggagga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagggaaggagcgctgggcagaccgaggggtgtaaacggccatggggaggaggaggagga 320

                                                                       
Query: 121 cagccattattggagtcatggctctggtttgttttaggaggctgagactcgtcctctact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagccattattggagtcatggctctggtttgttttaggaggctgagactcgtcctctact 380

                                                                       
Query: 181 ggagaaaaacctaagctgcgtgcacagcatgcctggagtcttcaagcacagcaaattcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagaaaaacctaagctgcgtgcacagcatgcctggagtcttcaagcacagcaaattcaa 440

                                                                       
Query: 241 ggccaggctggtgcacatgaggccatgttttaaagggcgggaaagacagtgcctgtgcct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggccaggctggtgcacatgaggccatgttttaaagggcgggaaagacagtgcctgtgcct 500

                                                                       
Query: 301 ttatccccagtttgatctgcagctggaatcaacatggtggaaagaaagaaccaactgcca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatccccagtttgatctgcagctggaatcaacatggtggaaagaaagaaccaactgcca 560

                                                        
Query: 361 caagttgttctctgattccctcttgtgtgccctttaggctctcga 405
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caagttgttctctgattccctcttgtgtgccctttaggctctcga 605


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space:   315216
Effective search space used:   315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)