TTCAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCTGCTTATCTGTGTACCCCATTTTTTCAGTTTGGTTACTTAGG
TTGTTGGTGTCTAGTTTCTCAAGTTCTTTAGTTATACTGGATATCAACCT
TATGTCAGATATATACATATATAGGGTTGGCGAAGGTCTTTTTCCATTAT
GTGGGCCATCGTTTTGTCTTAGTGACAGTGATATTTGCCTTATGGAAGCT
TTTCAATTTTATTAAGTCCAATTGATTAATTGGTTACCTTAGTGCCTGAG
CTGTTTGTGTTTTGTTCAGGAATTTGTCTCCTGTACCCATGCATTCAAGG
ATAGTGCTCACTCTATTAGATATAGTTTATCTGGGTCTGAGTTAAGATCT
TTGATCTATGTGAACTTGGGTTCTGTGCAGGGTGACAAATATGAATCTAT
TTGCATTATTCTACATGTATACATCTAGTTAGATGAGAACCATTTGTTGA
AGACGTTTTCTTTTTCCATAGTATAGTTGCCATGAGCTAGCTTGGCATCA
AATTCCCCAAGGGAAGCAGTAAAAAGAGATGTGGACCAATTCATCAGAGC
CAAAACCTGCTTACTTTTGGCAATTTAACTATTTCTTTAACTCTGCTGTC
CTGGGGACAAAAGCTGCTGGATTCTGGCAAGGACCCCTTGCTAGCCAGGC
AAGAGGCTTGGAGTTAATTAACTCTTCATGAGCTAGAGAGAACAGAAAAG
GA

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXACCTACTTCACATTTAAGTTA
TTGTTGTCAACCATCAAAAGTCTATACAACAACAATTCAAAATTTTAAAT
TTAAATAAAAAGTTTTAGTACAGTTATACATTACACATTGTGCATCCCCA
TGTATCCATTTCTCTTCACTCGTCCTCCTTCCTTCTCCACCCCCACTTAT
GCTTCTAAACAGTTACTTTTATTATACTTTTCTTTAAAATACACATAAAT
GAGTGTATGTAACTACTTAACATATATGAACAACACATAGTGAATATACA
CAATATTTGTCATTCTGAAATTGGCTTAATTCACATAAGGCAAGTAAGTG
TTTTAATTCATTCTTATTGTTTCATTCTATTTCTTAAGTAATTTGAGTAA
AAATAACCATTCTGTTTTTGAAATATATGACGTACCAAACCCTCAAGAGA
CTGGAGGTCCCAGGGAGTGAAAGGTGTGGTGGGCTGGGGGTGGTAAGGTG
GGGACATCCTCGTGGATATTTGGGGAAGGTGGTCTGGGATGTGGAACAGT
CAGAAGGTGAAGCAGGGGGATGATAAAACCTGGACAGTAAAAATTAAATG
AACAAAATTAAATTATAATGTTGTTCTCCCAATAGGGTTGTAAACCCTTT
CAGCTCCTTCAGAACTTTCTCTAATTCCTCCATTGGGGGACCTGTGCTCA
ATCCATTAGATTTCTGCA

Query= MSMg01no523_f14.g1 MSMg01no523_f14.g1 CHROMAT_FILE:
MSMg01no523_f14.g1 PHD_FILE: MSMg01no523_f14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:14 2005
         (595 letters)



>mm_chr4_76846976_76847970
          Length = 995

 Score = 1085 bits (561), Expect = 0.0
 Identities = 588/599 (98%), Gaps = 4/599 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acctacttcacatttaagttattgttgtcaaccatcaaaagtctatacaacaacaattca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acctacttcacatttaagttattgttgtcaaccatcaaaagtctatacaacaacaattca 622

                                                                       
Query: 61  aaattttaaatttaaataaaaagttttagtacagttatacattacacattgtgcatcccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaattttaaatttaaataaaaagttttagtacagttatacattacacattgtgcatcccc 562

                                                                       
Query: 121 atgtatccatttctcttcactcgtcctccttccttctccacccccacttatgcttctaaa 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgtatccatttctcttcactcatcctccttccttctccacccccacttatgcttctaaa 502

                                                                       
Query: 181 cagttacttttattatacttttctttaaaatacacataaatgagtgtatgtaactactta 240
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagttacttttcttatacttttctttaaaatacacataaatgagtgtatgtaactactta 442

                                                                       
Query: 241 acatatatgaacaacacatagtgaatatacacaatatttgtcattctgaaattggcttaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatatatgaacaacacatagtgaatatacacaatatttgtcattctgaaattggcttaa 382

                                                                       
Query: 301 ttcacataaggcaagtaagtgttttaattcattcttattgtttcattctatttcttaagt 360
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcacataaggcaattaagtgttttaattcattcttattgtttcattctatttcttaagt 322

                                                                       
Query: 361 aatttgagtaaaaataaccattctgtttttgaaatatatgacgtaccaaaccctcaagag 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 aatttgagtaaaaataaccattctgtttttgaaatatatgacgtaccaaaccatcaagag 262

                                                                       
Query: 421 actggaggtcccagggagtgaaaggtgtggtgggctgggggtggtaaggtggggacatcc 480
           | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 aatggaggtcccagggagtgaaaggtgtggtgggctgggcgtggtaaggtggggacatcc 202

                                                                       
Query: 481 tcgtggatatttggggaaggtggtctgggatgtggaacagtcagaaggtgaagcaggggg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcgtggatatttggggaaggtggtctgggatgtggaacagtcagaaggtgaagcaggggg 142

                                                                      
Query: 541 atgataaaacctggacagtaaaa----attaaatgaacaaaattaaattataatgttgt 595
           |||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||
Sbjct: 141 atgataaaacctggacagtaaaaaaatattaaatgaacaaaattaaattaaaatgttgt 83


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space:   576225
Effective search space used:   576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)