XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTTTTCT
GGTCCATTCTATTTTGAGTTCTGTAGGCTTCTTGTATGTTCATGGGCATC
TCTTCCTTTAGGTTTGGGAAGTTTTCTTCTATAATTTTGTTGCAGATATT
TGCTGGCCCCTTAAGGCGAAAATCTTCATTCTCATCTACTCCTAATATGC
CTAGTTTTGTTCTTCTCATTGTGTCCTGGATTTCCTGGATGTTTTGAGTT
AGGCTCTTTTTGCATTTTTTTTATGAGTGTTGTCCCAATGTTCACTATGG
AATATTTTTTTTTCTTTCCATTTTTTATTAGGTATTTAGCTCATTTACAT
TTTCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCACTCCCCT
ACCCGCCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTTCTGGGGCAT
ATAAAGTTTGTGTGTCCAATGGGCCTCTCTTTCCAGTGGTGGCCGACTAG
GCTATCTTTTGATACATATACAGCTAGAGTCAAGAGCTCCGGGGTACTGG
TTAGTTCATAATGTTGATCCACCTATAGGGTTGCAGATCCCTTTAGCTCC
TTGGGTTCTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATTCATCCATT
AGCTGACTGTGGGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAATCT
CACAAGAAACAGCTACATCTGGGTGCTTTCGATAAAATCTTGCTAATGTA
TGCAATGGTGTCAGCGTTTTGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXCCCCATTTCCTGACCCTTCCACCGGCCCCAATTCAGA
AATATCTCAACACCCATAATCAGCTTGAATAATTTCTGAAGATTTGTCAT
CCCAGTTCCCTGGTCTATAAGAATTGGGGTGGTTATTATTGGTTTTCTTT
GATACTAAGTTTTTTTGATGTACAGGGCATGTACCCAGTTCTTCTATTGC
CATTATTATAAACAGATATGAGATGTTTAATCCTGTGAGTTAAGGAGCAA
ATAGGAAATTTATGACAGAGTTTATCATTAGGATGTTTTCAGTTATTTTA
ATCCTAAGTGCCTGAGTGTAAGTAACAGACAACAATCCAGATTGCTTAAT
GTAGACAGTTGGCTTTCAAAATATCAAAAGTCTACAGAATGTGATATTTA
ATGTTATTTATTCAGTTGTTGAGACAAGTCTGCTCCTGAGAGTTTCTTCT
GTCATGGGTTCAAAGAAAACACAGAGCATCTTTGAATAACTCCAGTTTTG
GTGAAACAGCCACTGGAAACAATTGCCACCTTTCATTTACAGACATAATA
CTGTCCTAAGAAAGGACACAATTACAAGTTAAGATAACTTGATTATGTCA
AGACAGTGTAGTATAGTTCTTATTATTCCTATTTCTATAACTCTGTCAGA
ATACCCTGGCCTGTTGGCAGAAGATAGTGGCTCCCATGTGTAGAAGTAAG
GGACTGCAAGTGATCAGCAN

Query= MSMg01no524_e07.g1 MSMg01no524_e07.g1 CHROMAT_FILE:
MSMg01no524_e07.g1 PHD_FILE: MSMg01no524_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:29 2005
         (594 letters)



>mm_chr4_112716294_112717288
          Length = 995

 Score =  567 bits (293), Expect = e-165
 Identities = 522/601 (86%), Gaps = 16/601 (2%)
 Strand = Plus / Plus

                                                                       
Query: 3   ccatttcctgacccttccacc-ggccccaattcagaaatatctcaacacccataatcagc 61
           |||||||||||||||||| || |||| || ||||||||||||||||||||||||||||||
Sbjct: 203 ccatttcctgacccttccccctggccacacttcagaaatatctcaacacccataatcagc 262

                                                                       
Query: 62  ttgaataatttctgaa-gatttgtcatcccagttccctggtctataagaattggggtggt 120
           |||||||| ||||||| | |||||||||||||||||||||||| || |||||||||||||
Sbjct: 263 ttgaataagttctgaacg-tttgtcatcccagttccctggtctttaggaattggggtggt 321

                                                                       
Query: 121 tattattggttttctttgatactaagtttttttgatgtacagggcatgtacccagttctt 180
           |||||||||||| ||||||||||||  ||||| || |  | |||||||||||||||||| 
Sbjct: 322 tattattggtttcctttgatactaaaattttt-gaagggccgggcatgtacccagttctc 380

                                                                       
Query: 181 ctattgcca-ttattataaacagatatgagatgtttaatcctgtgagttaaggagcaaat 239
           ||||||| | ||||| |||||||||||||||  ||||| ||||||| | |||||| ||||
Sbjct: 381 ctattgc-agttattttaaacagatatgagacatttaagcctgtgaatcaaggagaaaat 439

                                                                       
Query: 240 aggaaatttatg--acagagtttatcattaggatgttttcagttattttaatcctaagtg 297
           |||||||| |||  || ||| ||||| ||||| |||||||||||||||||||||||| ||
Sbjct: 440 aggaaattcatgcaactgagattatcgttagggtgttttcagttattttaatcctaaatg 499

                                                                       
Query: 298 cctgagtgtaagtaacagacaacaatccagattgcttaatgtagacagttggctttcaaa 357
           ||| ||| |||| |||||| ||||||| ||||| |||||||||||||||| | |||||| 
Sbjct: 500 cctaagtataaggaacagagaacaatcgagattacttaatgtagacagtttgttttcaac 559

                                                                       
Query: 358 atatcaaaagtctacagaatgtgatatttaatgttatttattcagttgttg---agacaa 414
           |||||| ||||| | |||||||||  |||||||||||||||||||||||||   |||  |
Sbjct: 560 atatcagaagtccaaagaatgtgacgtttaatgttatttattcagttgttgttgagatta 619

                                                                       
Query: 415 gtctgctcctgagagtttct-tctgtcatgggttcaaagaaaacacagagcatctttgaa 473
           |||||||||||| ||||| | |||||| |  |||||||||||| ||||  ||| ||||||
Sbjct: 620 gtctgctcctgacagttt-tgtctgtcgtaagttcaaagaaaaaacag--catttttgaa 676

                                                                       
Query: 474 taactccagttttggtgaaacagccactggaaacaattgccacctttcatttacagacat 533
           ||| ||||||| || |||||||||||||||||||||||||| | |||| | || ||||||
Sbjct: 677 taattccagttgtgatgaaacagccactggaaacaattgcctcatttc-tctatagacat 735

                                                                       
Query: 534 aatactgtcctaagaaaggacacaattacaagttaagataacttgattatgtcaagacag 593
           |||| ||||| ||||||||||||||||||| |||| || |||||||||||| ||| ||||
Sbjct: 736 aatattgtccaaagaaaggacacaattacaggttacgacaacttgattatgccaatacag 795

            
Query: 594 t 594
           |
Sbjct: 796 t 796


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 995
Length adjustment: 10
Effective length of query: 584
Effective length of database: 985
Effective search space:   575240
Effective search space used:   575240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)