Query= MSMg01no526_k20.b1 MSMg01no526_k20.b1 CHROMAT_FILE:
MSMg01no526_k20.b1 PHD_FILE: MSMg01no526_k20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:40 2005
(573 letters)
>mm_chr4_152420230_152421207
Length = 978
Score = 785 bits (406), Expect = 0.0
Identities = 423/432 (97%), Gaps = 7/432 (1%)
Strand = Plus / Minus
Query: 147 atgcttgaggatattaattgttaacctggaagagtgtcttaatgacatatataataacta 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 atgcttgaggatattaattgttaacctggaagagtgtcttaatgacatatataataacta 919
Query: 207 actgcctcaagtccctgcccaaacttccctgctttagcgtactcaaacctggaatcgtaa 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 actgcctcaagtccctgcccaaacttccctgctttagcgtactcaaacctggaatcgtaa 859
Query: 267 attggcataaaccctttctccactaagttgctttttgtccaactattttagcacaacaac 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 attggcataaaccctttctccactaagttgctttttgtccaactattttagcacaacaac 799
Query: 327 agaaaaaaaaaaactaaagcagaaatcctgattaaaatttcaaattcctcaattgtttta 386
|| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ag--aaaaaaaaactaaagcaaaaatcctgattaaaatttcaaattcctcaattgtttta 741
Query: 387 tctgcagattctaatggagtctttaagttataaagtacattggtggctccactccgcctt 446
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 740 tctgcagattctaatggagtctttaagttataaagtacattggtggctccactctgcctt 681
Query: 447 agaaattatgtcttataaaacacatcttctatgtcctgatcctagaatagt-----atta 501
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 680 agaaattatgtcttataaaacacatcttctatgtcctgatcctagaatagtatgtaatta 621
Query: 502 ttttaagctccttgtctggtaacattatcattgccataagctctgggtcagttttagtta 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttttaagctccttgtctggtaacattatcattgccataagctctgggtcagttttagtta 561
Query: 562 tggcttttcctc 573
||||||||||||
Sbjct: 560 tggcttttcctc 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 978
Length adjustment: 10
Effective length of query: 563
Effective length of database: 968
Effective search space: 544984
Effective search space used: 544984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_k20.g1 MSMg01no526_k20.g1 CHROMAT_FILE:
MSMg01no526_k20.g1 PHD_FILE: MSMg01no526_k20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:40 2005
(169 letters)
>mm_chr4_152245919_152246487
Length = 569
Score = 286 bits (148), Expect = 4e-82
Identities = 163/168 (97%)
Strand = Plus / Plus
Query: 1 ctgtcctaactttcctagatgatggagtgtgactgggacatgtaaaccaaataaacctat 60
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtcctaacttccctggatgatggagtgtgactgggacatgtaaaccaaataaacctat 260
Query: 61 tgttatcacagcagcaggaaccaaattacgacagatgagtgttctccgggagaagaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttatcacagcagcaggaaccaaattacgacagatgagtgttctccgggagaagaaagc 320
Query: 121 agtccagtccgtggaggctgaggaggaggtggaggtggaggtggagga 168
||||||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 321 agtccagtccgtggaggctgaggaggaggaggaggaggaggaggagga 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
