Query= MSMg01no527_c07.b1 MSMg01no527_c07.b1 CHROMAT_FILE:
MSMg01no527_c07.b1 PHD_FILE: MSMg01no527_c07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:17 2005
(683 letters)
>mm_chr4_51110086_51111168
Length = 1083
Score = 1290 bits (667), Expect = 0.0
Identities = 673/675 (99%)
Strand = Plus / Plus
Query: 8 ttcaatatctgggtcataataatgagcaggtagatccttcagatatatctgtgccctcct 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttcaatatctgggtcataataatgagcaggtagatccttcagatatatctgtgccctcct 267
Query: 68 caccttgtggagtcctagacttaaatggacatttgtgatctggactcaggttcttgggct 127
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 caccttgtggagtcctagatttaaatggacatttgtgatctggactcaggttcttgggct 327
Query: 128 tatactgtcccctttctgggttgttacatgtgatgttcccactgtttttgaaattaattt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tatactgtcccctttctgggttgttacatgtgatgttcccactgtttttgaaattaattt 387
Query: 188 attttactacccattcacattgcccatgtgttcaaatcatttaggtatctgagcaaatac 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 attttactacccattcacattgcccatgtgttcaaatcatttaggtatctgagcaaatac 447
Query: 248 ctcattccctggaagaattttctatttaaaatgtgagtctcccagcacgtatctctggaa 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ctcattccctggaagaattttctatttaaaatgtgagtctcccagcacgtatctctggaa 507
Query: 308 tccttgcaataccttcccattaaattttcccacatgtattaatctataatgcaactccaa 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tccttgcaataccttcccattaaattttcccacatgtattaatctataatgcaactccaa 567
Query: 368 tatactttatgttttccatttcatgaccacatgttaaaatgttagctctatggagatgta 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tatactttatgttttccatttcatgaccacatgttaaaatgttagctctatggagatgta 627
Query: 428 gatttttattgctttgcttccatagagtcacattaatatggattttattttgtaaatgga 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gatttttattgctttgcttccatagagtcacattaatatggattttattttgtaaatgga 687
Query: 488 taaatgcatacttccccttatttttgatagacattcagacttccccatgcatatggagaa 547
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 caaatgcatacttccccttatttttgatagacattcagacttccccatgcatatggagaa 747
Query: 548 gggagaaagtggtcacatgaaaattgtcctccagcctctttcccagcaatatattctatg 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gggagaaagtggtcacatgaaaattgtcctccagcctctttcccagcaatatattctatg 807
Query: 608 taaacttcatgactagcaggtactttcaaatcatgtttatcttatatgctgtcattctac 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 taaacttcatgactagcaggtactttcaaatcatgtttatcttatatgctgtcattctac 867
Query: 668 cttcctgtagttccg 682
|||||||||||||||
Sbjct: 868 cttcctgtagttccg 882
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_c07.g1 MSMg01no527_c07.g1 CHROMAT_FILE:
MSMg01no527_c07.g1 PHD_FILE: MSMg01no527_c07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:17 2005
(649 letters)
>mm_chr4_51155618_51156667
Length = 1050
Score = 1218 bits (630), Expect = 0.0
Identities = 645/650 (99%), Gaps = 1/650 (0%)
Strand = Plus / Minus
Query: 1 ttataagtgaagggctgcatctcatgagaactatcttccatttcttgggaaagaa-ttat 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 684 ttataagtgaagggctgcatctcatgagaactatcttccatttcttgggaaagaatttat 625
Query: 60 atgcaggctgtctttttaaccctaaattgtaattaatgaaccatgggttttaactggtat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgcaggctgtctttttaaccctaaattgtaattaatgaaccatgggttttaactggtat 565
Query: 120 tgatcaagctattattctctcctttgaggctacagactgaaactggaatctatatctgtc 179
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgaccaagctattattctctcctttgaggctacagactgaaactggaatctatatctgtc 505
Query: 180 tttggtagatctaaacaatatgcctcaaataaactgggtcaataaatactatctgactgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttggtagatctaaacaatatgcctcaaataaactgggtcaataaatactatctgactgg 445
Query: 240 aaagacattctacccatcactcaaaagctcccaaagcttttgcatacttgagaagaaatt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaagacattctacccatcactcaaaagctcccaaagcttttgcatacttgagaagaaatt 385
Query: 300 gatgatgcaattcctttgcatacaagacttcctaccactgaagaacaggaataaaaaaca 359
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 384 gatgatgcaattcctttgcatacaagacttcctaacactgaagaacaggaataaaaaaca 325
Query: 360 taatcagttcctgggttgtgagtgaggtttctccaaacttatggtgtgtagggatgagaa 419
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 324 taatcagttcctgggttgtgagtgaggtttctccaaacttacggtgtgtagggatgagaa 265
Query: 420 taattttgaaatgacatttgagtcacaaacttgttcatgtttctggaatttatttttcat 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taattttgaaatgacatttgagtcacaaacttgttcatgtttctggaatttatttttcag 205
Query: 480 tactttgtatttatttataaatgtattcatttcttttaggtttcccagctttgtggaata 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tactttgtatttatttataaatgtattcatttcttttaggtttcccagctttgtggaata 145
Query: 540 taagttgggaaatattcattaatgatctgaatttcatatgaataaatactgtaacaattt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 taagttgggaaatattcattaatgatctgaatttcatatgaataaatactgtaacaattt 85
Query: 600 tattttcatctttagttttatttctttgagtcttctctttctttcctcct 649
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tattttcatctttagttttatttctttgagtcttctctttctttcctcct 35
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1050
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1040
Effective search space: 664560
Effective search space used: 664560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
