Query= MSMg01no529_h10.b1 MSMg01no529_h10.b1 CHROMAT_FILE:
MSMg01no529_h10.b1 PHD_FILE: MSMg01no529_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:26 2005
(657 letters)
>mm_chr4_126817746_126818802
Length = 1057
Score = 1174 bits (607), Expect = 0.0
Identities = 643/655 (98%), Gaps = 1/655 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaaagccgtcattggatggatagtgaatttgaggtcaggttatatgagactgtg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattcaaagccgtcattggatggatagtgaatttgaggtcaggttatatgagactgtg 262
Query: 64 tttttacaaagaaaaaagagaaataaatcactttgtgattatctgcctgtgaatttgtta 123
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 263 tttttacaaaggaaaaagagaaataaatcactttgtgattatctgcctgtaaatttgtta 322
Query: 124 tttttatttattattttttacctttttaaaaatggtttatttattttatgtatatgggta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tttttatttattattttttacctttttaaaaatggtttatttattttatgtatatgggta 382
Query: 184 aactgtagctgtacagatggttgtgagtcttcatgtggttgttgggaattgaatttcttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aactgtagctgtacagatggttgtgagtcttcatgtggttgttgggaattgaatttcttt 442
Query: 244 taggacctctgcttgctccagtcaaccctgctcgctcagtctctgcttgctcctgcccaa 303
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 443 taggacctctgcttgctccagtcaaccctgcttgctcagtctctgcttgctcctgcccaa 502
Query: 304 agatttatttattattatacataagtacactgtagctgtcttcagatacaccagaagagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 503 agatttatttattattatacataagtacactgtagctgtcttcagatacaccagaggagg 562
Query: 364 gcatcagatctcattaagggtggttgtgagccaccatgtagttgctgggatttgaactca 423
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gcgtcagatctcattaagggtggttgtgagccaccatgtagttgctgggatttgaactca 622
Query: 424 ggaccttcagaagagcagtcagtgctcttatctgctgagccatcttgccagcccatgttt 483
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gggccttcagaagagcagtcagtgctcttatctgctgagccatcttgccagcccatgttt 682
Query: 484 tgcctctttttttttttt-aatataaatgctttatttaacggttgcagatcattccatgg 542
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 683 tgcctctttttttttttttaatataaatgctttatttaacagttgcagatcattccatgg 742
Query: 543 gctaagtagtggatatccagaacccagctgcaagatcaatgcaaccttcgagcttctctt 602
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 743 gctaagtagtggatatccagaacccagctgcaagatcaacgcaaccttcgagcttctctt 802
Query: 603 tctgactccaataggatgagcaagtcaccctctcgaacgggtcctttgacatttc 657
||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||
Sbjct: 803 tctgactccaatagggtgagcatgtcaccctctcgaacaggtcctttgacatttc 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_h10.g1 MSMg01no529_h10.g1 CHROMAT_FILE:
MSMg01no529_h10.g1 PHD_FILE: MSMg01no529_h10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:26 2005
(653 letters)
>mm_chr4_126841188_126842241
Length = 1054
Score = 787 bits (407), Expect = 0.0
Identities = 422/427 (98%), Gaps = 1/427 (0%)
Strand = Plus / Minus
Query: 1 ttcgactgtctctgaatagc-ttttttttcttgccatgtgactttgcaactgtctaacca 59
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttcgactgtctctgaatagctttttttttcttgccatgtgactttgcaactgtctaacca 368
Query: 60 agagacgggctgtgctttcccttccacctgtgtggatctgtgacttttaacaagctttgg 119
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 agagacgagctgtgctttcccttccacctgtgtggatctgtgacttttaacaagctttgg 308
Query: 120 cagactgcaatgggaagtccactctttctcttgacctccagcctctggaaacccgagcta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cagactgcaatgggaagtccactctttctcttgacctccagcctctggaaacccgagcta 248
Query: 180 gcacactggagaatgatggacaagatgacagagagccgggccgtcccccctgtatcagtt 239
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 247 gcacactggagaatgatgggcaagatgacagagagccgggccgtcccacctgtatcagtt 188
Query: 240 actctcctgttgctgtgataaaacaccatgacctaaagcaacttacagaagaaagggttt 299
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 187 actctcctgttgctgtgataaaacaccatgacctaaagtaacttacagaagaaagggttt 128
Query: 300 gtgttggactgcagctcgagagggagtctatggaagacacagcagcgggtgtctggagca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gtgttggactgcagctcgagagggagtctatggaagacacagcagcgggtgtctggagca 68
Query: 360 agaagccaagagatcataccttcagctgtcaacatgaagcagagacggacctggaatcga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 agaagccaagagatcataccttcagctgtcaacatgaagcagagacggacctggaatcga 8
Query: 420 ggcaagg 426
|||||||
Sbjct: 7 ggcaagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1054
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1044
Effective search space: 671292
Effective search space used: 671292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
