CCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGTTGGATTTTTGTTGAGAATTGCATTGAATATATGGATTGTTTTC
AGCAAGATAGTCATTTTTACTATATTAATTCTGCTAATCCATGAGCATGG
GAGATCTTTCCATCGTCTGAGATCTTCTTTAATTTCTTTCTTCAGAAACT
TGAAGTTCTTATCATAAAGATCTTTCACTTCCTTAGTTAGAGTCACACCA
AGGTATTTTATATTATTTGTGAGTATTGTGAAGGGTGTTGTTTCACTAGT
TTCTTTCTCAGCCTGTTTATCCTTTGTGTAGAGAAAGGCCAAGGCCATTG
ATTTGATTGAGTTATTTATTTATTTATTTATTTTTGTTATTTGAGACAGG
GTTTCTCTGTACAGCCCTGGCTGTCATGAAACTCACTTTGTAGACCAAGC
TGGCCTTGAACTCAGAAATCTACCTACCTCTGCCTCCCGAGTGCTGGGAT
TAAAGGCGTGCGCTACCATGCCTGGCTTGAGTTAATTTTATATCCACCTA
ATTCACTGAAGCTGTTTATCAGGTTTAGGAGGTCTCTGGTGAAATTTTTA
GGATCACTTATACACTATCATATAATCTAGAAATAGTGATATTTTGACTT
CTTCCTTTCCAATTTTTGTCCCCTTGACCTCCCTATTTTTGTCTAATTCC
TCTGGCTAGGACTTCTAGTACTGTATTGAATAGGTATGGAGAGAGTGGAC
AGCCTTGTCTAGTCCCTGA

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACTGAGAAGGCATAAATGGCAGATATA
TCTGCTTTATAATATATTAGGTAAAGTAATTCATACTCTGAGACTTCATT
TTCTCAAATTCTTGGGGCAAAATCTCTTATCTTCTATAAAATGTCACAGG
GACCACAAATCTTCTGTTGGTTTCCAGTTTAGTGTTTCCATGTACGTCAG
TTTTGCTCACTGAGAACAAGAGGAAATTTAATAGTAATCATCAAAAACAG
GTGAAGAATGCAGCTTTCCCCTCCAAATAAGCAGACTGTTTCTCTCTGAC
CATTACCTTCCTTGGGAGCATAACAGAAAATAATACAGAAAGAGTATACA
GTGGCAGGATAATAATGAAAGAAACATATATTTTTGATTGCACTGATATC
ATTTAATTCATCATTTTTAGTGCTATAAAGACCTTAGATTTCATGTTACT
TGAACCACTGGATTTGTTTACTGTTCAAGCATCTTTAAACTGAATAATCT
GATACCAGACAAGTGAAACAAGCAAATTACAATGGGAAGAAAGCAAATGG
ATATAAGCAAGGTAGATATTTTCTTAAGTCATCTAGTATTAAAAAACAAA
ACTAAAAGCAATACTACTTATGATATTTAACAGTAACATCAAAAGAAGCC
ATAGTTTCAGTAGTATTATGAAGTAAACACACTGAATGTTTCAGCTATGT
CATCTTGCTTCAG

Query= MSMg01no529_j15.g1 MSMg01no529_j15.g1 CHROMAT_FILE:
MSMg01no529_j15.g1 PHD_FILE: MSMg01no529_j15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:39 2005
         (690 letters)



>mm_chr4_37684226_37685315
          Length = 1090

 Score = 1265 bits (654), Expect = 0.0
 Identities = 681/690 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgagaaggcataaatggcagatatatctgctttataatatattaggtaaagtaattca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 actgagaaggcataaatggcagatatatctgctttataatatattaggtaaagtaattca 831

                                                                       
Query: 61  tactctgagacttcattttctcaaattcttggggcaaaatctcttatcttctataaaatg 120
           |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 tactctgagaatttattttctcaaattcttggggcaaaatctcttatcttctataaaatg 771

                                                                       
Query: 121 tcacagggaccacaaatcttctgttggtttccagtttagtgtttccatgtacgtcagttt 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 770 tcacagggaccacaaatcttctgttggtttccagtttattgtttccatgtacgtcagttt 711

                                                                       
Query: 181 tgctcactgagaacaagaggaaatttaatagtaatcatcaaaaacaggtgaagaatgcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tgctcactgagaacaagaggaaatttaatagtaatcatcaaaaacaggtgaagaatgcag 651

                                                                       
Query: 241 ctttcccctccaaataagcagactgtttctctctgaccattaccttccttgggagcataa 300
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ctttcccctccaaataaacagactgtttctctctgaccattaccttccttgggagcataa 591

                                                                       
Query: 301 cagaaaataatacagaaagagtatacagtggcaggataataatgaaagaaacatatattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cagaaaataatacagaaagagtatacagtggcaggataataatgaaagaaacatatattt 531

                                                                       
Query: 361 ttgattgcactgatatcatttaattcatcatttttagtgctataaagaccttagatttca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttgattgcactgatatcatttaattcatcatttttagtgctataaagaccttagatttca 471

                                                                       
Query: 421 tgttacttgaaccactggatttgtttactgttcaagcatctttaaactgaataatctgat 480
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tgttacatgaaccactggatttgtttactgttcaagcatctttaaactgaataatctgat 411

                                                                       
Query: 481 accagacaagtgaaacaagcaaattacaatgggaagaaagcaaatggatataagcaaggt 540
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 accagacaagtgaaataagcaaattacaatgggaagaaagcaaatggatataagcaaggt 351

                                                                       
Query: 541 agatattttcttaagtcatctagtattaaaaaacaaaactaaaagcaatactacttatga 600
           ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agatattatcttaagtcatttagtattaaaaaacaaaactaaaagcaatactacttatga 291

                                                                       
Query: 601 tatttaacagtaacatcaaaagaagccatagtttcagtagtattatgaagtaaacacact 660
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 290 tatttaacagtaacatcaaaagaagccatagtttcagtagtattataaagtaaacacact 231

                                         
Query: 661 gaatgtttcagctatgtcatcttgcttcag 690
           ||||||||||||||||||||||||||||||
Sbjct: 230 gaatgtttcagctatgtcatcttgcttcag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space:   734400
Effective search space used:   734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)