Query= MSMg01no531_b10.b1 MSMg01no531_b10.b1 CHROMAT_FILE:
MSMg01no531_b10.b1 PHD_FILE: MSMg01no531_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:37 2005
(357 letters)
>mm_chr4_151498684_151499440
Length = 757
Score = 571 bits (295), Expect = e-167
Identities = 330/357 (92%), Gaps = 24/357 (6%)
Strand = Plus / Plus
Query: 1 gggctcttcagttgggggttctgaactaggcaggtttgaggttgggggaggtgcagcggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggctcttcagttgggggttctgaactaggcaggtttgaggttgggggaggtgcagcggg 260
Query: 61 aggcagtggcggtggcgcaggggttgggtcttctgtctggtcctctggcgagccctgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggcagtggcggtggcgcaggggttgggtcttctgtctggtcctctggcgagccctgtga 320
Query: 121 tggagcggattcttcttcggtgggctcctctctctcctctctctcctctttctcatcctc 180
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 321 tggagcggattcttcttcggtgggctcctctctcttctctctatcctctttctcatcctc 380
Query: 181 ctcccctttcttctccctgtctttctcatcctctctcttctcttcctcctcttcctcctc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcccctttcttctccctgtctttctcatcctctctcttctcttcctcctc--------- 431
Query: 241 ctcctcctcctcctcctcctcctcctcctccagtttctccttctcttcctccttctcttc 300
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ---------------ctcctcctcctcctccagtttctccttctcttcctccttctcttc 476
Query: 301 ctcctggccttgctctttctcctccccttcttcctcttcctctcgagtctcttctgg 357
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctcctggtcttgctctttctcctccccttcttcctcttcctctcgagtctcttctgg 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space: 260304
Effective search space used: 260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_b10.g1 MSMg01no531_b10.g1 CHROMAT_FILE:
MSMg01no531_b10.g1 PHD_FILE: MSMg01no531_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:37 2005
(617 letters)
>mm_chr4_151673278_151674296
Length = 1019
Score = 1147 bits (593), Expect = 0.0
Identities = 612/619 (98%), Gaps = 2/619 (0%)
Strand = Plus / Minus
Query: 1 tccagcgaatggagcctgccctgtataaacagcttagggagaggagagggctggggagaa 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 tccagcgagtggagcctgccctgtataaacagcttagggagaggagagggctggggagaa 760
Query: 61 gagctcaggggagattaggcctgggaggcggctcaatgtcatcttcccagcctctctccc 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 759 gagctcaggggagattaggcctgggaggcggctcaatgtcatcttcccggcctctctccc 700
Query: 121 acacctaggaaagtagggcacaccaacctggccagaagatgttctcgagcgtgaactcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 acacctaggaaagtagggcacaccaacctggccagaagatgttctcgagcgtgaactcta 640
Query: 181 tccaagaagacagggcagctaccgtgtactccaggctgtgattcaggaggaaggagtcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tccaagaagacagggcagctaccgtgtactccaggctgtgattcaggaggaaggagtcca 580
Query: 241 gggacagacttttggggttattgacagctgtcactaagtactcagaatagtggaacagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gggacagacttttggggttattgacagctgtcactaagtactcagaatagtggaacagag 520
Query: 301 acagcgagcacacgtacctatttaaaaacaaaacggaagaggtaaagcaggcaagagaac 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 519 acagcgagcacacgtacctatttaaaaacaaaacagaagaggtaaagcaggcaagagaac 460
Query: 361 caagttaggcaaaagcacagatctggtctgctcagctgccccagactggcatgtggtgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 caagttaggcaaaagcacagatctggtctgctcagctgccccagactggcatgtggtgct 400
Query: 421 gccgtcacccacctgggtgacaccagg--cacacacacactcaggtcactcccttccctc 478
||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 399 gccgtcacccacctgggtgacaccaggcacacacacacacgcaggtcactcccttccctc 340
Query: 479 tccagcaggcacaagtgtggttccctggtgctatcatgtttctgaatgtcacagacaaaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tccagcaggcacaagtgtggttccctggtgctatcatgtttctgaatgtcacagacaaaa 280
Query: 539 ctaacagatctccataggtgaaggagaagctatggtccctttactcctttaatatgacag 598
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctaaaagatctccataggtgaaggagaagctatggtccctttactcctttaatatgacag 220
Query: 599 ttttcacatgttaacatga 617
|||||||||||||||||||
Sbjct: 219 ttttcacatgttaacatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1019
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1009
Effective search space: 612463
Effective search space used: 612463
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
